Neisseria meningitidis 8013 (serogroup C): NMV_1734
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Entry
NMV_1734 CDS
T01928
Symbol
ligA
Name
(GenBank) DNA ligase (polydeoxyribonucleotide synthase [NAD+])
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
nmt
Neisseria meningitidis 8013 (serogroup C)
Pathway
nmt03030
DNA replication
nmt03410
Base excision repair
nmt03420
Nucleotide excision repair
nmt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nmt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NMV_1734 (ligA)
03410 Base excision repair
NMV_1734 (ligA)
03420 Nucleotide excision repair
NMV_1734 (ligA)
03430 Mismatch repair
NMV_1734 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nmt03032
]
NMV_1734 (ligA)
03400 DNA repair and recombination proteins [BR:
nmt03400
]
NMV_1734 (ligA)
Enzymes [BR:
nmt01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
NMV_1734 (ligA)
DNA replication proteins [BR:
nmt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NMV_1734 (ligA)
DNA repair and recombination proteins [BR:
nmt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
NMV_1734 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NMV_1734 (ligA)
MMR (mismatch excision repair)
DNA ligase
NMV_1734 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NMV_1734 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
PTCB-BRCT
HHH_5
Nlig-Ia
BRCT_2
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
CAX50546
UniProt:
A0A9K2KPF2
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All DBs
Position
1677493..1680018
Genome browser
AA seq
841 aa
AA seq
DB search
MNPNSKHNTNFTNLLKPSDSDIKQFAAQHIRHLTDLLNRYAYEYYTLDAPSVPDAEYDRL
FRELEALELNHPEFKLPDSPTQRVGGEPLAGFAEVRHEVPMLSLTNAFSPQDENGVFDHA
EMYAFDQRVRDGLDGGKPEYVIEPKFDGLAISLLYRDGVLVQAATRGDGTTGEDVTQNIK
TVSNIPLRLHGENTPELIEVRGEVLMQKADFAALNKRQAENGQKPFANPRNAAAGSLRQL
DSRITAQRKLHFFPYSVARQQGGFVAEEHIQELAYFQALGFSLPNGNFGCFKNIDEVLAF
YEQMQQKRPELPYEIDGMVVKVNSLAQQRELGFISRAPRWAIAHKFPAEEALTIVEAIDV
QIGRTGAVTPVARLQPVFVGGVTVTNATLHNQDEVSRKDVRVGDTVVVRRAGDVIPEVVR
VIFERRPMRETAVAVSDGIGHRQDDLFAETPSANQTQSVPLHKPYRLPTHCPICRSEIER
EEGEAVARCSGGMLCQAQRAQGLIHFASRKAMDIDGLGEKQIEQLVAQDLVRHFADLYRL
DIPTLQKMKEAADKTVAESDQMPSEDSSVGASGKHKKPPTKWAENILAGIESGKTPELAR
FLFALGIRHVGERTAKTLAQAFGTLEHVRRAPEPVLACLPDIGTVVARSIAHFFAQAEQQ
AMIDELLAAGVAPQTQAVTIPPARHAEPQRWIARLPDFKISENKAQALWELAGKNIEGLQ
NDKALPADWQAWRSEPQNAALLENLKTFFAQMPSEDEAAQGSDGINEAVAGKTFVLTGTL
PTLKRDQAQSLIEAAGGKVSGSVSKKTDYVVAGEAAGSKLEKANALGVSVLSEAELLTLL
G
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgaatccaaactcaaaacataacactaactttaccaatcttcttaaaccgtctgatagt
gatataaaacaatttgccgcacaacacatccgccacctcaccgacctgctcaaccgctac
gcctacgaatactacaccctcgatgcacccagcgtacccgatgccgaatacgaccgcctg
ttccgcgaactcgaagccctcgagctgaaccatcccgaattcaaactgcccgacagcccg
actcagcgcgtcggcggcgagcctttggcgggatttgccgaagtacgccacgaagtgccg
atgctgtcgctgaccaacgccttttctccgcaagatgaaaacggcgtgttcgaccacgcc
gaaatgtatgccttcgaccaacgcgtgcgcgacggtttggacggcggcaaacccgaatac
gttatcgaacccaaattcgacggcctcgccatcagcctgctctaccgcgacggcgtattg
gtacaggcggcaacgcgcggcgacggcacaacgggcgaagacgttacccaaaacatcaaa
accgtatccaacatccccttgcggctgcacggcgaaaatacgcccgaactcatcgaagta
cgcggcgaagtactgatgcaaaaagccgattttgccgccctcaataaaagacaagccgaa
aacgggcaaaaaccctttgccaatccgcgcaacgccgctgccggcagcctgcgccaactc
gattcgcgcatcactgcgcaacgcaaactgcactttttcccctactccgtcgcccgccag
caaggcggtttcgtcgcggaagaacacatccaagaactcgcctatttccaagcactcggc
ttcagtctgccaaatggcaatttcggctgtttcaaaaatatcgacgaagtattggcgttt
tacgaacaaatgcagcaaaaacgccccgaactgccctacgaaatcgacggtatggtggtc
aaagtcaacagcttggcgcaacagcgcgaactcggcttcatctcacgcgcgccacgctgg
gcgattgcccacaaattccctgccgaagaagccctgaccattgtcgaagcgattgacgtg
caaatcggcaggacgggcgcggtaacgccggttgcccgattacaacccgtattcgtcggc
ggcgtaaccgttaccaacgccaccctgcacaatcaggacgaagtatcgcgtaaagacgtg
cgcgtcggcgataccgtcgtcgtgcgccgcgccggagacgtgattcccgaagttgtgcgc
gtgatttttgaacgccgcccgatgcgggaaaccgccgttgccgtttcagacggcatcggg
catcggcaggacgatttgtttgccgaaacaccgtccgctaatcaaacccaatccgttccg
ctccacaagccctaccgcctgccgacccattgccccatctgccgcagcgaaatcgaacgc
gaagaaggcgaagccgtcgcccgatgcagcggcggcatgctttgtcaggcacaacgcgcg
caaggcttaatccacttcgcctcgcgcaaagcgatggacatcgacggcttgggtgaaaaa
caaatcgaacagcttgtcgcccaagacctcgtccgccacttcgccgacctctaccgcctc
gatattccgaccctgcaaaaaatgaaggaagcggcggacaaaaccgttgccgaatcggat
caaatgccgtctgaagacagttcggtcggcgcgtcgggcaaacataaaaaaccaccgacc
aagtgggcggaaaacatcctcgcaggcatagaatccggcaaaacgcccgaactcgcgcgc
ttcctgttcgcgctcggcatccgccacgtcggcgaacgcaccgccaaaacgctggcgcag
gcattcggcacattggaacacgtccgccgcgcccccgaacccgtcctcgcctgcctgccc
gacatcggtacggtagtggcgcgttccattgcccacttcttcgcccaagccgaacagcag
gcgatgatagacgaactgctcgccgcaggcgttgccccgcaaacccaagccgttaccatc
ccgcccgcccgccacgccgaaccgcaacgctggatcgcccgcctgcccgacttcaaaatt
agcgaaaacaaagcccaagccttatgggaactcgctggtaaaaacatagaaggtctacaa
aacgacaaagccctccccgccgactggcaagcatggcgcagcgaaccacaaaacgccgcc
ctactcgaaaacctgaaaaccttcttcgcgcaaatgccgtctgaagacgaggcggcgcaa
ggttcagacggcatcaacgaagccgtagcaggcaaaacctttgtattaaccggcaccctg
cccacgctcaaacgcgaccaagcccaatccctaatcgaagccgcaggcggcaaagtttcc
ggcagcgtgtccaaaaaaaccgactacgtcgtcgccggagaagccgcgggcagcaagctg
gaaaaagccaatgccttgggcgtttccgtcctcagcgaagccgaactgcttaccctgctc
ggctga
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