KEGG   Neisseria musculi: H7A79_0358
Entry
H7A79_0358        CDS       T07094                                 
Symbol
ligA
Name
(GenBank) DNA ligase NAD-dependent
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
nmus  Neisseria musculi
Pathway
nmus03030  DNA replication
nmus03410  Base excision repair
nmus03420  Nucleotide excision repair
nmus03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:nmus00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    H7A79_0358 (ligA)
   03410 Base excision repair
    H7A79_0358 (ligA)
   03420 Nucleotide excision repair
    H7A79_0358 (ligA)
   03430 Mismatch repair
    H7A79_0358 (ligA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nmus03032]
    H7A79_0358 (ligA)
   03400 DNA repair and recombination proteins [BR:nmus03400]
    H7A79_0358 (ligA)
Enzymes [BR:nmus01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     H7A79_0358 (ligA)
DNA replication proteins [BR:nmus03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     H7A79_0358 (ligA)
DNA repair and recombination proteins [BR:nmus03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     H7A79_0358 (ligA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     H7A79_0358 (ligA)
   MMR (mismatch excision repair)
    DNA ligase
     H7A79_0358 (ligA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      H7A79_0358 (ligA)
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD PTCB-BRCT HHH_5 BRCT_2 Nlig-Ia DUF2116 5_3_exonuc
Other DBs
NCBI-ProteinID: QNT58014
UniProt: A0A7H1M8P9
LinkDB
Position
complement(408205..410643)
AA seq 812 aa
MDNPALRIRELTGLLNRYAYEYYTLDAPSVPDAEYDTLFRELETLEAARPDLRLPDSPTL
RVGGEPLAGFESVRHEVPMLSLSNAFSPQHESGTFDHAEMYTFDGRVRGSLGGRQPEYVV
EPKFDGLAVSLLYRSGVLERAATRGDGSVGENVTPNVKTIANVPLRLHGDQVPELIEVRG
EVMMLKADFAALNHQQAAAGQKLFANPRNAAAGSLRQLDSRITARRRLHFSAYAIARREG
GFAPATHFEELEYLKKLGFSLPEGHYGVFPDIAGALAFYEAMQQQRPKLPYEIDGMVVKV
NSLAEQQKLGFISRAPRWAVAHKFPAEEALTVVEAIDVQVGRTGAVTPVARLQPVFVGGV
TVTNATLHNEGETQRKDVRVGDTVVVRRAGDVIPEVVRVVLERRPMSEAAAVSDGLQGDM
FAGPSESRSEPVYPPYCLPRHCPICGSGIEREEDEAVARCSGGMLCRAQRAQGLIHFASR
KAMDIEGLGQRQIEQLVAQDWVKHFADLYRLDIPTLQQMKENADKSETQPENGGETLSDG
RKNGKKQPPVKWAENILAGIEASKQPELARFLFALGIRHVGERTAKSLAQAFGTLETVRR
VPEPLLACLPDIGTVVAHSIARFFAQTGQQAMIDELLAAGVSPKSQPVTLLVSQYAQPQK
WLARLSGYKTSETRAAALWDLAGRSMAGLINDNALPAQWQQWRSRPENLALLHSIEAFLN
GMPSENPNTVSDGPAALAGKTFVLTGTLPTLKRDEAQALIEAAGGKVSGSVSKKTDYVVA
GEAAGSKLEKAQALGVAVLDEAQLKALLDSGK
NT seq 2439 nt   +upstreamnt  +downstreamnt
atggacaatcccgccctccgcatccgcgaactgaccggcctgctcaaccgctacgcctac
gaatactacacccttgatgcccccagcgttcccgatgccgaatacgacacgctctttcgc
gagctggaaacgcttgaagccgcccgccccgatttgcgcctgcccgacagccccaccctg
cgcgtgggcggcgagccgctggcaggttttgagagcgtgcgccacgaagtgccgatgctc
tcgctttccaacgctttttcgccgcagcacgaaagcggcacgttcgaccatgccgaaatg
tatacgtttgacgggcgcgtgcgcggcagcctgggcggccggcagcccgaatatgttgtc
gaaccgaaatttgacgggctggccgtgagcctgctctaccgcagcggcgtgctggaacgc
gccgccacgcgcggcgacggctcggtgggcgaaaacgttaccccaaatgtgaaaaccatc
gccaacgtgccgctcaggctgcacggcgatcaagtgcccgaactcatcgaagtgcgcggc
gaagtgatgatgctcaaagccgattttgccgccctgaaccaccagcaggccgccgccggc
caaaaactgtttgccaacccgcgcaacgccgccgccggcagtctgcgccagctcgattcg
cgcatcaccgcccgccgccgcctgcacttttctgcctacgccatcgcccgccgcgaaggc
ggctttgcgcccgccacccattttgaagagctggaatacttgaaaaaactgggcttcagc
ctgcccgagggccattacggcgtattccccgacatcgccggcgcgttggcgttttacgaa
gccatgcagcagcaacgccccaagctgccctatgaaatagacggcatggtggtgaaagta
aacagcctggccgaacagcagaaattgggttttatttcgcgcgcaccgcgctgggccgtt
gcacacaagttccccgccgaagaagccctcaccgtggtggaagccatcgatgtgcaggtg
gggcgcaccggcgcggtcacgcccgttgcccgcctgcagccggtgtttgtgggcggcgta
accgttaccaacgccaccctgcacaacgaaggcgaaacgcagcgcaaagacgtgcgggtg
ggcgacaccgtggtggttcgccgcgcgggcgatgtgattcccgaagtggtgcgcgtggtg
ttagagcgccgcccgatgagcgaagccgccgccgtttcagacggcctgcagggcgatatg
tttgcggggccgtctgaaagccgcagcgaacccgtttacccgccatactgcctgccccgg
cactgcccgatttgcggcagcggcatcgagcgcgaagaagacgaagcggtggcacggtgc
agcggcggcatgctgtgccgcgcccaacgcgcacaggggctgattcacttcgcctcgcgc
aaagcaatggacatcgaaggcctggggcagcggcaaatcgagcagctggtggcgcaggat
tgggtgaaacatttcgccgatttataccgcctcgatattcccaccctgcagcagatgaaa
gaaaacgccgacaaaagcgaaacacaaccggaaaacggcggcgaaacgctttcagacggc
cgcaaaaacggcaaaaaacagccgcccgtcaaatgggccgaaaatattctcgccggcatc
gaagcgagcaaacagcccgagttggcgcgctttctgtttgcgctgggcatacgccatgtg
ggcgagcgcaccgccaaatcactggcgcaggcgttcggcacgctcgaaacagtgcgccgc
gtccccgagccgctgctggcctgcctgcccgacatcggcaccgtggtggcgcattccatt
gcccgatttttcgcccaaaccgggcagcaggccatgatagacgagctgctggctgccggc
gtatcgccgaaaagccagcccgttaccctgctggtttcacaatatgcccaaccgcagaaa
tggctcgcccgcctgagcggctacaaaaccagcgaaacccgcgccgccgcactgtgggat
ttggccggcagaagcatggccggcctgataaacgacaacgcactgcccgcgcaatggcag
caatggcgcagccggcctgaaaacctcgccctgctgcacagcatcgaagcatttttaaac
gggatgccgtctgaaaacccaaacacggtttcagacggccccgccgcgctggcgggcaaa
accttcgtgctcaccggcaccctgcccacgctcaagcgcgatgaagctcaagccctgatt
gaagccgcaggcggtaaagtttcgggcagcgtgtcgaaaaaaaccgactatgtggtggca
ggcgaagcagcgggcagcaagctcgaaaaagcgcaggccttgggcgtggcggtgttggat
gaagcgcaactgaaggctttgctggatagcggcaaatga

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