Nitrospira moscoviensis: NITMOv2_2299
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Entry
NITMOv2_2299 CDS
T04041
Symbol
ligA
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
nmv
Nitrospira moscoviensis
Pathway
nmv03030
DNA replication
nmv03410
Base excision repair
nmv03420
Nucleotide excision repair
nmv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nmv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NITMOv2_2299 (ligA)
03410 Base excision repair
NITMOv2_2299 (ligA)
03420 Nucleotide excision repair
NITMOv2_2299 (ligA)
03430 Mismatch repair
NITMOv2_2299 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nmv03032
]
NITMOv2_2299 (ligA)
03400 DNA repair and recombination proteins [BR:
nmv03400
]
NITMOv2_2299 (ligA)
Enzymes [BR:
nmv01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
NITMOv2_2299 (ligA)
DNA replication proteins [BR:
nmv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NITMOv2_2299 (ligA)
DNA repair and recombination proteins [BR:
nmv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
NITMOv2_2299 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NITMOv2_2299 (ligA)
MMR (mismatch excision repair)
DNA ligase
NITMOv2_2299 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NITMOv2_2299 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
BRCT
HHH_5
Nlig-Ia
PTCB-BRCT
DNA_ligase_ZBD
BRCT_2
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
ALA58715
UniProt:
A0A0K2GCN1
LinkDB
All DBs
Position
2144431..2146554
Genome browser
AA seq
707 aa
AA seq
DB search
MLRSLHFLQIEHLRADRTVTPRDLFHPPERSPHERPGGVRDRLAQLRETIRHHDYLYYVK
DRPEISDGEYDRLFQELVELEAAHPDLVTPDSPTQRVGAAPLAELGKIQHERPMLSLDSL
VNPEDVRSFDLRMKRELGVQAVEYTVEPKFDGLSVELVYDRGRFVRGSTRGDGNTGEDVT
ANLRTIRSLPLHLQAGADAPAHLAARAEVYMRLDDFQRLNRRMVERSEEPFANPRNAAAG
SLRQLDPRITAGRPLVVTCYEIVVMDKPQPETHWAELDALARWGLPVPAHRRLCDAIDDV
MAFHRETEAQRDQLAYEIDGIVVKVNRRDWQERLGAKSRSPRWAVAFKFPPRKEITVVQN
IIVSIGRTGTLTPLALLRPVEVGGVTISRATLHNADEVARKDIRVGDTVKVERAGDVIPA
IAGRVPVPNETRSEPFTMPDHCPICGSAVAREGAYFYCTGLAVCPAQLRGTIEHFASKQA
MNIEGLGKKTVAQLVDRGLVKTLADLYRLTKEQVLTLEGFADRSADLLMASIERSKQVPL
GRFLMGLGIRQVGRHIANVLAKEFGSLDAIMAADKERLESVKEIGPEISSSLVSFFQEAS
NRRVIEQLRELGLSIEESAPQRDRSRLPLSGQVFVFTGGLEAFGREEAKALVEQLGGTVS
SSVGKHTTYVVAGHEAGSKLDRARELGVRILNEDEFKELVKPALNSG
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgctacggtcactccactttcttcagatcgaacacctccgagcagaccggacagtgacg
ccgcgagacctcttccatccgcccgagcgatcgcctcacgaaaggcccggcggagtacgg
gaccggctggcgcagctccgtgagaccatccggcaccacgattacctctactatgtcaaa
gatcggccggagatctcggacggcgaatatgaccgcctcttccaggagctggtggagctg
gaagcggctcaccccgacctcgtcacgccggactcgcccactcaacgcgtcggcgccgcg
ccgctggcggagctgggaaaaatccaacacgagcgtccgatgctcagcctcgactccctg
gtcaatcccgaggacgtgcgctcgttcgatctgcgcatgaagcgggaattgggcgtccag
gcggtcgagtatacggtcgagccgaagttcgacgggttgtcggtggagctcgtctacgac
cgcggccgctttgtccggggatcgaccaggggcgacggcaacacgggcgaagacgtcacg
gcgaatttgcggacgatccgctcgctgccgctccacctacaggcgggcgccgatgcgccg
gctcatctcgcagcccgcgcggaagtctacatgcggctggacgattttcaacggctcaat
cgccgcatggtggaacggagcgaagaacccttcgccaatccccggaacgcggcggccggc
tcgctccgccagttggatccacgcatcaccgccggccgcccgctcgtcgtcacctgttac
gagatcgtggtcatggataaaccgcagcctgaaacacactgggccgagctcgacgcgctg
gcgaggtgggggcttcctgtccccgctcaccgccgcctgtgcgacgccatcgacgatgtg
atggcattccaccgtgaaaccgaggcgcagcgggatcagctggcgtatgagatcgacggg
atcgtggtgaaggtgaatcgccgggactggcaggagcggctcggtgcaaaatcgcggagc
ccgcgctgggcggtggccttcaagtttcccccgcgcaaggagatcaccgtcgtgcagaat
atcatcgtgtcgatcgggcgcaccggcacgctcacgcccctcgcgctgctgcggccggtg
gaagtgggcggcgtgaccatcagccgggcgaccctgcacaatgccgacgaagtggcccgc
aaagacatccgcgtgggagacacggtgaaggtggagcgggcgggcgacgtgattccggcg
atcgccgggcgggtgccggtgccgaacgaaacccggtcggaaccgttcacgatgcccgat
cactgtcccatctgcgggtccgccgtggcgcgcgaaggggcgtacttctactgcacgggt
ctggcggtctgtccggcgcaattgagaggcacgatcgagcacttcgcctccaagcaggcc
atgaacatcgaaggcctcggcaagaagaccgtggcgcaactggtggatcggggactggtc
aaaacgctcgcggatctctatcgcctgacgaaagagcaggtgctgacgctggaaggcttt
gccgaccgctcggcagacctgttgatggcctccatcgaacgcagcaagcaggtgccgctg
ggacgcttcctgatgggattgggcatccggcaggtcggccggcacatcgccaacgtcctg
gccaaagaattcggctcgctcgacgcgattatggcggctgacaaggagcgcctcgagtct
gtcaaggagatcggtccggagatttcatcgagtctcgtgtcgttcttccaggaagcgtcg
aatcgccgggtgatcgagcaattgcgcgagttgggcctgtcgatcgaggaatcagcccct
cagcgcgaccggtcccggctgccgctttccggccaggtcttcgtctttaccggcgggcta
gaggcgttcggccgcgaggaggcgaaggcgctcgtcgaacaactgggcggaacggtctcc
tccagcgtcggcaaacacacaacctatgtggtggcggggcacgaggccggctcgaagctc
gaccgggcgagggaattgggagtccggatcctgaatgaagatgagttcaaggagttggtg
aagccggcgctcaactcaggctga
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