Neisseria meningitidis NZ-05/33 (serogroup B): NMBNZ0533_0712
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Entry
NMBNZ0533_0712 CDS
T01949
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
nmz
Neisseria meningitidis NZ-05/33 (serogroup B)
Pathway
nmz03030
DNA replication
nmz03410
Base excision repair
nmz03420
Nucleotide excision repair
nmz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nmz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NMBNZ0533_0712
03410 Base excision repair
NMBNZ0533_0712
03420 Nucleotide excision repair
NMBNZ0533_0712
03430 Mismatch repair
NMBNZ0533_0712
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nmz03032
]
NMBNZ0533_0712
03400 DNA repair and recombination proteins [BR:
nmz03400
]
NMBNZ0533_0712
Enzymes [BR:
nmz01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
NMBNZ0533_0712
DNA replication proteins [BR:
nmz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NMBNZ0533_0712
DNA repair and recombination proteins [BR:
nmz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
NMBNZ0533_0712
NER (nucleotide excision repair)
GGR (global genome repair) factors
NMBNZ0533_0712
MMR (mismatch excision repair)
DNA ligase
NMBNZ0533_0712
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NMBNZ0533_0712
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
Nlig-Ia
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
PTCB-BRCT
BRCT_2
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
ADZ03164
LinkDB
All DBs
Position
complement(768251..770776)
Genome browser
AA seq
841 aa
AA seq
DB search
MNPNSKHNTNFTNLLKPSDSDIKQFAAQHIRHLTDLLNRYAYEYYTLDAPSVPDAEYDKL
FRELEALELNHPELKLPDSPTQRVGGEPLAGFAEVRHEVPMLSLTNAFSPQDENGVFDHA
EMYAFDQRVRDGLDGGKPEYVIEPKFDGLAISLLYRDGVLVQAATRGDGTTGEDVTQNIK
TVANIPLRLHGENTPELIEVRGEVLMQKADFAALNKRQAENGQKPFANPRNAAAGSLRQL
DSRITAQRKLHFFPYSVARQQGGFVAEEHIQELAYFQALGFSLPNGNFGCFKNIDEVLAF
YEQMQQKRPELPYEIDGMVVKVNSLAQQRELGFISRAPRWAIAHKFPAEEALTIVEAIDV
QIGRTGAVTPVARLQPVFVGGVTVTNATLHNQDEVSRKDVRVGDTVVVRRAGDVIPEVVR
VIFERRPMQETAVAVSDGIGHRQDDLFAETPSANQTQSVPLHKPYRLPTHCPICRSEIER
EEGEAVARCSGGMLCQAQRAQGLIHFASRKAMDIDGLGEKQIEQLVAQDLVRHFADLYRL
DIPTLQKMKETTDKTVAESDQTPSEGSSVGASGKHKKQPVKWAENILGGIESGKTPELAR
FLFALGIRHVGERTAKTLAQAFGTLERVRRAPEPVLACLPDIGTVVAHSIAHFFAQAEQQ
AMIDELLAAGVAPQTQAVTIPPARHAEPQRWIARLPDFKISENKAQALWELAGKNIEGLQ
NDKALPADWQAWRSEPQNAALLENLKTFFAQMPSEDEAAQGSDGINKAVAGKTFVLTGTL
PTLKRDQAQSLIEAAGGKVSGSVSKKTDYVVAGEAAGSKLEKANALGVSVLSEAELLTLL
G
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgaatccaaactcaaaacataacactaactttaccaatcttcttaaaccgtctgatagt
gatataaaacaatttgccgcacaacacatccgccacctcaccgacctgctcaaccgctat
gcctacgaatactacaccctcgacgcgcccagcgtacccgatgccgaatacgacaaatta
ttccgcgagctcgaagcgttggaattaaaccatcccgagctcaaactgcccgacagtccg
acccagcgcgtcggcggcgagcctttagcgggatttgccgaagtgcgccacgaagtgccg
atgctgtcgctgaccaacgctttttccccgcaagatgaaaacggcgtgttcgaccatgcc
gaaatgtacgctttcgaccaacgcgtgcgcgacggtttggacggcggcaaacccgaatac
gttatcgaacccaaattcgacggcctcgccatcagcctgctctaccgcgacggcgtattg
gtacaggcggcaacgcgcggcgacggcacaacgggcgaagacgttacccaaaacatcaaa
accgtcgccaacatccccctgcggctgcacggcgaaaatacgcccgaactcatcgaagta
cgcggcgaagtactgatgcaaaaagccgattttgccgccctcaataaaagacaagccgaa
aacgggcaaaaaccctttgccaatccgcgcaacgccgctgccggcagcctgcgccaactc
gattcgcgcatcactgcgcaacgcaaactgcactttttcccctactccgtcgcccgccag
caaggcggtttcgtcgcggaagaacacatccaagaactcgcctatttccaagcactcggc
ttcagtctgccaaatggcaatttcggctgtttcaaaaatatcgacgaagtattggcgttt
tacgaacaaatgcagcaaaaacgccccgaactgccctacgaaatcgacggtatggtggtc
aaagtcaacagcttggcgcaacagcgcgaactcggcttcatctcacgcgcgccacgctgg
gcgattgcccacaaattccctgccgaagaagccctgaccattgtcgaagcgattgacgtg
caaatcggcaggacgggcgcggtaacgccggttgcccgattacaacccgtattcgtcggc
ggcgtaaccgttaccaacgccaccctgcacaatcaggacgaagtttcccgaaaagacgtg
cgcgtcggcgataccgtcgtcgtgcgccgcgctggagacgtgattcccgaagtcgtgcgt
gtgatttttgaacgccgcccgatgcaggaaaccgccgttgctgtttcagacggcatcggg
catcggcaggacgatttgtttgccgaaacaccgtccgctaatcaaacccaatccgttccg
ctccacaagccctaccgcctgccgacccattgccccatctgccgcagcgaaatcgaacgc
gaagaaggcgaagccgtcgcccgatgcagcggcggtatgctttgtcaggcacaacgcgcg
caaggcttaatccacttcgcctcgcgcaaagccatggacatcgacggcttgggtgaaaaa
caaatcgaacagcttgtcgcccaagacctcgtccgccacttcgccgacctctaccgcctc
gatattccgaccctgcaaaaaatgaaagaaacgacggacaaaaccgttgccgaatcggat
caaacgccgtctgaaggcagttcggtcggcgcgtcgggcaaacataaaaaacaaccggtc
aagtgggcggaaaacatcctcgggggcatagaatccggcaaaacgcccgaactcgcgcgc
ttcctgttcgcgctcggcatccgccacgtcggcgaacgcaccgccaaaacgctggcgcag
gcattcggcacattggaacgcgtccgccgcgcccccgaacccgtcctcgcctgcctgccc
gacatcggtacggtagtggcgcattccattgcccacttcttcgcccaagccgaacagcag
gcgatgatagacgaactgctcgccgcaggcgttgccccgcaaacccaagccgttaccatc
ccgcccgcccgccacgccgaaccgcaacgctggatcgcccgcctgcccgacttcaaaatt
agcgaaaacaaagcccaagccttatgggaactcgctggtaaaaacatagaaggtctacaa
aacgacaaagccctccccgccgactggcaagcatggcgcagcgaaccacaaaacgccgcc
ctactcgaaaacctgaaaaccttcttcgcgcaaatgccgtctgaagacgaggcggcgcaa
ggttcagacggcatcaataaagccgtagcaggcaaaacctttgtattaaccggcaccctg
cccacgctcaaacgcgaccaagcccaatccctaatcgaagccgcaggcggcaaagtttcc
ggcagcgtgtccaaaaaaaccgactacgtcgtcgccggagaagccgcgggcagcaagctg
gaaaaagccaatgccttgggcgtttccgtcctcagcgaagccgaactgcttaccctgctc
ggctga
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