Candidatus Nitrospira neomarina: PQG83_15875
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Entry
PQG83_15875 CDS
T09428
Name
(GenBank) KamA family radical SAM protein
KO
K01843
lysine 2,3-aminomutase [EC:
5.4.3.2
]
Organism
nneo
Candidatus Nitrospira neomarina
Pathway
nneo00310
Lysine degradation
nneo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nneo00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
PQG83_15875
Enzymes [BR:
nneo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.3 Transferring amino groups
5.4.3.2 lysine 2,3-aminomutase
PQG83_15875
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Gene cluster
GFIT
Motif
Pfam:
LAM_C
Radical_SAM
Fer4_12
Radical_SAM_2
Motif
Other DBs
NCBI-ProteinID:
WNM61220
UniProt:
A0AA96GJ98
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All DBs
Position
3681773..3682897
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AA seq
374 aa
AA seq
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MDDWKKVLAASITKPKDLAKYLGVDPKEVEAVVGPYPMRITPTVLATIKSKGDAIWKQVV
PEAIELDDIDAPDDPLEEDTDSPVPHLVHRYPDRVLLMVTNQCPIYCRFCTRKRLVGKPG
FLKKGELDRAVAYLKEHTEVRDVILSGGDPLLLPDRLIERILKGLRSIPHLELIRFGTRV
PGTLPQRITPELCEIVKRFHPIYMNLHFNHPDELTPEVKEACGRLADAGVPLGAQTVLLK
GVNDDPEIMKRLMHQLLLARVKPYYLYQADLTKGTNHFRTPVETGLKMIQSLQGHTSGMA
VPHFVIDAPGGGGKIPLLPNDYLLNLDENGAVLKNYENKTYHYPQPASGNGRELPMVGAP
ASQDMCGAGAMDDY
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggatgattggaaaaaggtcctcgccgcaagtatcaccaaacccaaggatttagccaag
tatctgggggtcgatcccaaggaggtggaagccgtcgtggggccctatccaatgcgaatt
actccgacagtgctggccacgattaaaagtaaaggggatgcgatctggaagcaggtagtc
ccggaggccatcgaattggatgatatcgatgcccctgacgatccgttggaagaagatacg
gacagtccggttcctcatttggttcaccggtatcctgatcgcgtattgttgatggtgacc
aaccaatgtccaatctattgtcggttttgcacgagaaagcgactggtggggaaaccgggg
tttctcaaaaagggtgagctggatcgagcggtggcgtaccttaaagagcatactgaagta
cgggatgtcatcctgtccggcggtgacccgttgttgttgcctgatcgtctcattgagaga
attctgaaaggtcttcggtccatcccgcatttagaattgattcggtttgggacccgcgtg
ccaggaactctccctcaacgcattactcccgaattgtgtgagatcgtgaagcgcttccat
ccaatttatatgaatttgcatttcaaccatccggatgagttgacgccggaggtcaaggag
gcttgtggtcgattggcggatgccggggtgcccttgggtgctcaaaccgttttgctgaaa
ggtgtcaatgatgaccctgaaatcatgaaacggctgatgcatcaactgttgttggccaga
gtgaaaccctattacctgtatcaagccgatctcaccaaggggacgaatcatttccggacg
ccggtagaaacggggttgaaaatgattcaatctcttcaggggcatacgagtggcatggcc
gttccccactttgtcattgatgcgccaggaggtggcggaaagatcccgctattgcctaac
gattatttattgaatttggatgaaaacggggccgtattaaaaaattacgaaaataaaacc
tatcattatcctcagccggcatcgggaaacgggcgtgagctccccatggtaggcgcccct
gcatcccaggatatgtgcggtgccggcgccatggatgactattaa
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