Candidatus Nitrospira neomarina: PQG83_19230
Help
Entry
PQG83_19230 CDS
T09428
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
nneo
Candidatus Nitrospira neomarina
Pathway
nneo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nneo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PQG83_19230 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nneo03400
]
PQG83_19230 (nth)
Enzymes [BR:
nneo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PQG83_19230 (nth)
DNA repair and recombination proteins [BR:
nneo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PQG83_19230 (nth)
Prokaryotic type
PQG83_19230 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_5
RecR_HhH
HHH_8
Motif
Other DBs
NCBI-ProteinID:
WNM61852
UniProt:
A0AA96GIB2
LinkDB
All DBs
Position
4421720..4422403
Genome browser
AA seq
227 aa
AA seq
DB search
MSRLRTARSPIESPVEAKKRVRRILAALDQSVPDVRVELDSSNRLELLVATILSAQCTDQ
RVNQVTPILFARFRTAQDYASADPAELEALIRTTGFYKNKARHLIGCGQTLVQRFHGMVP
GTMKDLTSLPGVGRKTANVILGSSVGEPAIVVDTHVKRVANRLGLTRSQDPAKIEEDLQR
LLPKSKWTNGAQRLLLHGRYVCLARTPKCAHCVLDSDCGWEGKRKPT
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtctcagaacagcaagatctccgatagaatcgcctgtagaagcgaagaagcgg
gtacgtcggatccttgccgccttggatcaatccgttcctgacgtgagagtagagttagat
tcctccaaccgacttgagttgttagtggccacaattctttcggcccaatgcacagaccag
agagtcaaccaggtgaccccaatcctgtttgcccgctttcgcacggcacaggattatgcc
agtgcggatccagccgaattggaagcgctcattcggacaacgggattttataaaaataaa
gcgcgtcatctcattgggtgtggccaaactctggtgcagcgttttcacggaatggtgcct
ggaacgatgaaggacttaacatccctgcccggcgttggacgaaaaacagccaatgttatt
ttggggagttctgtgggagagcctgccattgtggtagatactcatgtaaagcgggtggcc
aatcgcctcggattgacgagaagccaggacccggccaaaattgaagaggatcttcaacgc
ctcttacccaaatccaaatggacgaacggggctcaacgcctcctgcttcatgggcgatat
gtgtgtttggccagaacgccaaagtgtgctcattgtgtgcttgattcagactgtggatgg
gaaggaaaacgaaagccaacatga
DBGET
integrated database retrieval system
