Nipponia nippon (crested ibis): 104008971
Help
Entry
104008971 CDS
T05756
Symbol
AGRN
Name
(RefSeq) agrin
KO
K06254
agrin
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni04512
ECM-receptor interaction
nni04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104008971 (AGRN)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
104008971 (AGRN)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
nni00535
]
104008971 (AGRN)
Proteoglycans [BR:
nni00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
104008971 (AGRN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_1
Kazal_2
Laminin_G_2
Kazal_1
NtA
EGF_laminin
SEA
EGF
Kazal_CFAI
Laminin_G_3
hEGF
Motif
Other DBs
NCBI-GeneID:
104008971
NCBI-ProteinID:
XP_009459195
LinkDB
All DBs
Position
Unknown
AA seq
2025 aa
AA seq
DB search
MNVDPVHHTYSCKVRVWRYLKGKDIVTHEILLDGGNKVVIGGFGDPLICDNQVSTGDTRI
FFVNPAPQYMWPAHRNELMLNSSLMRITLRNLEEVEHCVEEHRKLLADKPNSYFTQTPPT
PRDACRGMLCGFGAVCERSSTDPSQASCVCKKTACPVVVAPVCGSDYSTYSNECELEKAQ
CNQQRRIKVISKGPCGSKDPCAEVTCSFGSTCVRSTDGQSAKCVCPSSCSGVPESTVCGS
DGRDYRSECDLNKHACDKQENVFKKFDGACDPCKGVLNDMNRVCRVNPRTRRVDLLSRPE
NCPPKRELVCGDDGVTYDNECVMGRSGAIRGLEIQKVRSGQCQPQDKCKDECKFNAVCLN
RRGTARCSCDRITCDGAYRPVCAQDSRTYSNDCERQKAECHQKAAIPVKHSGPCDLGTPS
PCLSVECTFGATCVVKNQEAVCECQQVCQGRYDPVCGSDNRTYGNPCELDSMACVLKREI
KVKHKGPCDRCGKCQFGAICEAETGRCVCPTECVPSSQPVCGTDGNTYGSECELHVRACT
QQTNILVAAQGDCKSCGSTVCSFGSKCVGGQCVCPRCERQPFAQVCGSDGLTYDNQCELQ
VASCQQKKSIEVARMGPCEDECGSGGSGSGDGSECEQDRCRQYGGWWDEDAEDDRCVCDF
TCLAVPRNPVCGSDGVTYTNECELKKTRCEKRQDLYVTSQGACRALATTPPPLLVVHCSQ
TIYGCCPDNMTLALGVGAAGCPSTCQCNPYGSYGGSCDPATGQCSCKPGVGGLKCDRCEP
GFWNFRGIVTDSKSGCTPCNCDPVGSVRDDCEQMTGLCSCKTGITGMKCNQCPNGSKLGM
TGCEKDPSAPKSCEEMSCEFGASCVEVNGFAHCECPSPLCLEANMTKVCGSDGVTYGDQC
QLKTIACRQGQLITVKHVGQCHESITHTSHTSPPTPPPTLPLDKLILPPPLRLTTQAPEP
TELATSSLLLEARPTERGHPTTRRITTARPATTPWMTHGVYKTTVRPLSTAPVVLATTQP
AYVESGSAEGSGDQEMGISGDQESSGAGSAGEEEAEESQVTSTPAIERATCYNTPLGCCS
DGKTAAADAEGSNCPATKVFQGVLILEEVEGQELFYTPEMADPKSELFGETARSIESALD
ELFRNSDVKKDFKSIRVRDLGQSSAVRVIVESHFDPATSYTAADIQGALLKQIKASKKKT
ILVKKPQQEHVKFMDFDWIPRLFTTTVTTTTATTMAPTTTRRYTTAAAATTVHVLRPDAA
GQPSTKMAGAVSTKRPTSTLPATTRRKPTRQPPATKKPSRPCDSHPCLHGGTCEDDGKEF
TCSCPAGKGGAVCEKSIRYFIPSFGGKSYLAFKMMKAYHTVRIAMEFRTVELSGLLLYNG
QNRGKDFISLALVGGFVELRFNTGSGTGIITSKVRVEPGKWHQLVVNRNRRSGMLSVDGE
PHVSGESPTGTDGLNLDTDLFIGGAPEDQMAVVTDRTAATTGLKGCIRLLDVNNQMYDLR
EKGSDVLYGSGVGECGNDPCHPNPCHHGGICHVKEAEMFHCECLYTYTGPTCADERNPCD
PTPCHVSATCLVLPEGGALCACPMGREGDFCELVTEQDHTMPFLPEFNGFSYLELNGLQT
FVPDLDKMSMEVVFLAKNPSGMIFYNGQKTDGKGDFVSLALHDGYLEYRYDLGKGAAVLR
SKEPVPLNTWISVLLERNGRKGVMRINNGERVMGESPKSRKVPHTFLNLKEPFYVGGAPD
FSKLARAAAISTSFDGAVQRISVKGVPVLKEQNIRSAIEISPFRGHPCTQKPNPCQNGGT
CSPRLESYECACQRGFSGAHCEKVIIEKAAGDAEAIAFDGRTYMEYHNAVTKSPEALDYP
AEPSEKALQSNHFELSIKTEATQGLILWSGKGLERSDYIALAIVDGFVQMTYDLGSKPVV
LRSTVPVNTNQWIHIKAYRVQREGSLQVGNEAPIAGSSPLGATQLDTDGALWLGGMEKLS
VAHKLPKAYSTGFIGCIRDVIVDRQELHLVEDALNNPTILHCSAK
NT seq
6078 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtggaccccgtccaccacacctactcctgcaaggtgagagtctggcgttatctg
aaaggcaaagacatcgtcactcatgagatcctcttggatggtgggaacaaggtggttatc
ggtggcttcggggacccgttaatctgcgacaaccaagtctcaactggggacacacggatt
ttcttcgtcaaccctgccccacagtacatgtggccggcacaccgcaatgagctgatgctg
aactccagcctcatgcggataacgctgcgcaacctggaggaggtggagcactgcgtggaa
gaacataggaagcttcttgctgacaagcccaatagttattttactcagacgccgccgacg
ccgcgagatgcatgtcgagggatgctgtgcgggttcggggcggtgtgtgagaggagctcc
accgacccctcccaggcctcctgcgtctgcaagaagacagcttgccctgtcgtggtggct
cctgtctgcggctctgattactccacctacagcaatgagtgtgagctggagaaggcccag
tgcaaccagcagaggcggatcaaagtcatcagcaagggaccgtgtggctccaaggacccc
tgcgcagaggtgacctgcagctttggcagcacgtgcgtccgctccactgacggccagtcg
gccaagtgcgtctgcccatcgtcctgcagcggtgtgcccgagagcacggtgtgcggcagt
gacggcagagactaccgcagcgagtgcgacctcaacaagcacgcctgcgacaagcaggag
aatgttttcaagaagtttgatggcgcctgtgacccttgtaaaggcgtcctcaacgacatg
aatcgtgtctgccgggtgaacccccgcacccgaagggtggatctgctctcccgccctgag
aactgtcccccaaagagggagcttgtgtgcggcgacgacggggtgacttacgacaacgag
tgcgtgatggggcgctcgggggccatccggggactggagatccagaaggtgcgttcaggg
cagtgccagcctcaggacaaatgcaaggacgagtgcaagttcaacgctgtctgcctgaac
cgccgtggcaccgctcgctgctcctgcgaccgcatcacctgcgatggcgcctaccggcct
gtctgtgcccaggacagccggacctacagcaatgactgcgagcgccagaaggccgagtgc
caccagaaggctgccatcccagtaaagcacagcggaccctgtgacctgggcacacccagc
ccatgcctgagcgtggagtgcaccttcggggccacgtgcgtggtgaagaaccaggaggcc
gtgtgcgagtgccagcaggtgtgccagggccgctacgaccccgtgtgcggcagcgacaac
cgcacctatggcaacccttgcgagcttgactccatggcctgtgtcctcaagagggagatc
aaagtgaagcacaaggggccctgcgaccgttgcggcaagtgccagtttggggccatctgt
gaggcggagacgggaaggtgcgtgtgccccacggagtgcgttccctcctctcagcctgtg
tgcggcacagatggcaacacgtacggcagcgagtgcgagctccatgtccgggcgtgcacg
cagcagacgaacattttggtggctgcccaaggagactgcaagtcctgcggcagcacggtg
tgctccttcggcagcaagtgcgtgggcgggcagtgcgtgtgcccgcgctgcgagaggcag
cccttcgctcaggtgtgcgggagcgatggcctcacctacgacaaccagtgcgagctgcag
gtggcctcctgccagcagaagaagagcattgaggttgcccggatggggccgtgtgaggac
gagtgcggctcagggggctcgggctccggcgacggtagtgagtgtgaacaggaccggtgc
cggcagtacgggggctggtgggacgaggatgcagaggatgaccgctgtgtgtgtgacttc
acctgcctggcagtgccacgcaacccggtgtgtggctctgatggtgtgacctacaccaac
gagtgtgagctgaagaagacacggtgtgaaaaacgccaggatctctatgtcactagccaa
ggagcctgccgtgcccttgccacaaccccgccgcctctcctggttgtgcactgcagccag
accatctatggatgctgcccagacaacatgactttggcgctcggagtgggtgcagctgga
tgcccaagcacctgccagtgcaacccctatggctcctacgggggatcctgcgaccctgca
acggggcagtgctcctgcaagccaggcgtggggggcctgaagtgcgaccgctgcgagccc
ggcttctggaacttccgtggcatcgtcaccgacagcaagagcggctgcacgccctgcaac
tgcgacccggtgggctcggtgcgtgatgactgtgagcagatgactggactgtgctcctgc
aagactggtatcaccggcatgaaatgcaaccagtgccccaatggcagcaagctgggcatg
actggctgtgagaaagacccgtcagccccaaaatcctgtgaggaaatgagctgcgagttt
ggggcctcgtgcgtggaagtcaacggctttgcccactgcgagtgcccatccccgctctgc
ttggaggccaacatgaccaaggtgtgtggctctgatggtgtcacttatggggaccagtgc
cagctgaagaccatcgcttgccggcagggacagctcatcacagtgaagcatgtggggcag
tgccacgagtccatcactcacacaagccacacctcaccacccacaccgccgcccacacta
cccctggacaagttaatccttcctccgccactgcggctcaccacccaggctccagaaccc
accgagctggctaccagctccctgctgttggaagccaggcctactgaaagaggtcaccct
acaacaaggcgcatcacgactgccagaccagccactacgccatggatgacccacggggtg
tataagaccaccgtccgccctctctccaccgcgccagtggtcctggccaccacccagcct
gcctatgttgaatcaggcagtgcagaaggcagtggagaccaagagatgggcatcagtgga
gaccaggaatctagtggagcaggctctgctggggaagaggaggcggaggaaagccaggta
acttccaccccagccatcgagagggcaacatgttacaacaccccgctgggatgctgctct
gatggcaagactgcagccgctgatgcggaaggcagcaactgtccagctaccaaagtcttc
caaggagtcctcatcttggaggaggtggaaggccaggagctgttctacacacccgagatg
gctgaccccaagtcagaactctttggggagacggccaggagcattgagagtgcgctggat
gagcttttccgcaattctgatgttaagaaggatttcaagagcatccgtgtccgagacctg
gggcagagcagtgctgtccgtgtcattgtggagtcccactttgacccagccacttcttac
acagcagctgatatccaaggggccctgctgaagcagatcaaggcttccaagaagaagacc
atcctggtgaagaagccccagcaggagcatgtcaaattcatggactttgactggatcccc
aggctcttcaccaccactgtgaccacaaccacagccaccaccatggcacccaccaccacc
cggaggtacaccacggccgccgctgccaccactgtccacgtcctgcgcccagacgctgcg
ggccaacccagcaccaagatggcaggagctgtgagcaccaagagacccacgtccaccctc
cctgccaccacccggcggaagcccacgcgccagccccctgccacgaagaaaccctcgcgg
ccctgcgactctcacccctgcctgcacggtggcacctgcgaggatgatgggaaggagttc
acctgcagctgcccggcaggcaaagggggagccgtctgtgagaaatctatcaggtacttc
atccccagctttggtggcaagtcctacctggccttcaagatgatgaaggcataccacacc
gtgcgcatcgccatggagttcaggactgtggagctcagcgggctgctgctctacaatggg
cagaaccgcggcaaagacttcatttccctggcgctggttggcggcttcgtggagctcagg
tttaacaccggttctggcacgggcatcatcaccagcaaggtccgtgttgagcctggcaag
tggcaccagttagtggtgaaccgcaaccgccgcagtggcatgctgtctgtcgacggggag
ccccacgtcagcggggagagcccaacgggcaccgacgggctcaacctcgacacagacctg
ttcatcgggggagcgccggaggaccaaatggctgtggtgacagatcgtactgcagctaca
accggcctgaagggctgcatccgcctcctggacgtgaacaaccagatgtacgacctgcgg
gagaaaggcagtgatgtgctgtatggcagcggggtgggcgagtgcggcaacgacccctgt
caccccaacccctgccaccatggtggcatctgccatgtcaaggaggcagagatgttccac
tgcgagtgtctctacacctacaccggcccaacgtgtgctgatgagaggaatccctgcgac
cctacgccctgccacgtctctgccacctgcctggtgctgccagagggaggtgccttgtgc
gcctgtcccatgggccgggaaggagacttctgcgagctagtgacagagcaggaccacacc
atgcccttcctcccggagttcaatggcttctcctacctggagctgaatgggctgcagacc
ttcgttcctgacctggacaaaatgtccatggaagttgtgttcctggccaagaaccccagt
ggcatgatcttctacaacggacagaagacagatggcaaaggggactttgtctctctggcc
ttacacgatggctacctggagtacagatacgacctgggcaaaggggcagcggtgctcagg
agcaaagaaccagttcccctcaacacttggataagtgtcttgttggagagaaatgggcgc
aaaggggtaatgaggatcaacaacggcgagagggtgatgggagagtcaccgaaatcccgt
aaggtgcctcacaccttcctgaacctgaaggagccattttatgtggggggagccccagat
ttcagcaagctagctcgagcagctgccatctctaccagctttgatggagctgtgcagagg
atctccgtcaagggggtgcctgtgctgaaggagcagaacatccgcagcgccattgagatc
tccccgttccgaggccacccctgtacccagaaacctaatccctgccagaacggaggcact
tgcagcccccggctagagagctacgagtgtgcctgccagaggggcttctccggggctcac
tgtgagaaagtgatcattgagaaggctgctggagatgcagaggccattgcttttgatggt
aggacatatatggagtaccacaatgccgtgacaaagagtcccgaagcactggactatcct
gcggagcccagcgagaaggccttgcaatcgaaccactttgaactaagcatcaaaacagaa
gccactcaggggctgatcctgtggagcgggaaggggctggagcgatcagactacatcgcc
ctcgccatagtggatggcttcgtacaaatgacctatgatctcggctccaagccagtcgtc
ctacgatccacggtcccagtcaacaccaaccagtggattcacatcaaagcatacagggta
cagagagaaggttcccttcaagtcggcaacgaagcccccattgctggctcttctccgctt
ggtgcaacacagctagatacagatggggccctgtggctgggggggatggagaagctgagc
gtggctcacaagctgcccaaggcctacagcaccggctttattggctgcataagggacgtg
attgtcgaccgccaagaactgcatctggtggaggacgctttaaacaaccccacaatatta
cactgctcagccaaatag
DBGET
integrated database retrieval system