KEGG   Nipponia nippon (crested ibis): 104009881
Entry
104009881         CDS       T05756                                 
Symbol
BRCA1
Name
(RefSeq) breast cancer type 1 susceptibility protein
  KO
K10605  breast cancer type 1 susceptibility protein [EC:2.3.2.27]
Organism
nni  Nipponia nippon (crested ibis)
Pathway
nni03440  Homologous recombination
nni03460  Fanconi anemia pathway
nni04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:nni00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    104009881 (BRCA1)
  09124 Replication and repair
   03440 Homologous recombination
    104009881 (BRCA1)
   03460 Fanconi anemia pathway
    104009881 (BRCA1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:nni01009]
    104009881 (BRCA1)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:nni04121]
    104009881 (BRCA1)
   03036 Chromosome and associated proteins [BR:nni03036]
    104009881 (BRCA1)
   03400 DNA repair and recombination proteins [BR:nni03400]
    104009881 (BRCA1)
Enzymes [BR:nni01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     104009881 (BRCA1)
Protein phosphatases and associated proteins [BR:nni01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     104009881 (BRCA1)
Ubiquitin system [BR:nni04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    104009881 (BRCA1)
  Multi subunit type E3
   BRCC complex
    104009881 (BRCA1)
Chromosome and associated proteins [BR:nni03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     104009881 (BRCA1)
DNA repair and recombination proteins [BR:nni03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-core complex
     104009881 (BRCA1)
    BRCA1-A complex
     104009881 (BRCA1)
    BRCA1-B complex
     104009881 (BRCA1)
    BRCA1-C complex
     104009881 (BRCA1)
    BRCA complex
     104009881 (BRCA1)
   FA (Fanconi anemia) pathway
    Downstream FA components
     104009881 (BRCA1)
SSDB
Motif
Pfam: BRCT_assoc BRCT zf-C3HC4 zf-C3HC4_4 zf-C3HC4_2 zf-RING_2 BRCT_2 zf-RING_UBOX zf-C3HC4_3 zf-RING_6 BRCT_3 zf-Nse RING_XB3-XBAT31 zf-RING_5 RTT107_BRCT_5 zf-ANAPC11 Zf_2nd_IFT121 TRAF3_RING zf-RING_4 zf-MIZ
Other DBs
NCBI-GeneID: 104009881
NCBI-ProteinID: XP_009460193
LinkDB
Position
Unknown
AA seq 1763 aa
MDFSVIAIGDVQNVLSAMQKNLECPICLDVVKEPVSTKCDHIFCRFCMFKLLSKKKTGVV
QCPLCKTEVTKRSLKENSRFKQLIEGLLETIHAFELDTGVKFLSSHHFHKTSTEATAAEF
PCKESSVIQSKGFRNRKKSAKENGQGNCTLEANVDTQLTDTRVKRCPLRNKTQKRDSEKG
IYIEFGSDSSEELFKQASSTGLEDKEVLQTSSQEKLEELKSAEKGNEYSCNTQPDKLGAK
EIILPNVVGESDFSKEGLSKKSTRSITEYAKPGQAHTTEYQSSPLTVLAADLLTEQCDRI
GNASPSRNGDTSFSKNTEEMDAEQTWCNSKSKEFDLKDSSESRLDKSKEIDIVVQSVEAV
EMYETENDSFNEKELPLEKPLQPEALHSATLTQVSRKRLKRSIQKVNEWFSKSNEILSSN
SSQDDSAGATDVSGEGDTCLSDKDSCISEKTDPMIDSMEIAVAEGNKTWSKQTDSIKDKI
FGKTYRRERKSNPAIILREILPTTKKEGVATDEKCLNNSSKDGLKRKRKTARVLQPEDFI
KKKDTKEAGGCPQSVNWCPGDAKKKRCDESSAVNESLLSKNREDNTLAEHEEGGGSIWKK
ATEKVTGKHCDGELELSNRDQKSTKRSSAAKRCRRSTRAMCALQLVVDRNSVSPDPAEPQ
IDSYPSSEEPRKVDSEHRQVRRSRRLQLISEEITKETGKGVVIKGARKYDSDQEGCFFGD
QRNVLVHTTECEDLCEPQGMSYKPLANLKGGDLEANEIQISVKNSSDAAETGKSLFNPAS
SCQHSNCSSFAPDAGSQEGEIQGSPFLLQSPSMTVVQTASHPTEEITESCTTFLQDSGHD
TQNVPGNFRTEKLPVAKNVSELTKEAEDSELDTQYLRNIFRHSKRLSFSLYPTPTKACAV
EDAASEPLKVSCADQVENKHSKYLKTENLQGEKTTAESSSRVCEKEKLKTSESACVSPVT
CFVGNAECMHTGEHQDVSQAANQGNLTPVRAGTARTEDKNGPQKGEQGNEKAVTTDIGIE
SELRQNPIKNKGSQSDQSNAEEHIFKRADLNTVGEICFSADSNQAGKAQVVDGKGPVLHF
QSRSTICPVTCQQRPAEFSCAVTGKKSSKRERKQVKGNEEQATQTASTGMPECLVTEAPE
EPLKGNTDFAGLSESPDGLLCLDDDIEENTSFSETDRKERSAVFVKGSDNALAKVVHNRN
VSSQPGSQGIQRSRRKAQKLQSSDEESSEDEDLPCFQALIFGKSVSTPFQINKQVTSVVE
ASQSPITLPHNGAHDDNNRQKMREAALSNECVSPSQDSECSVNLFSSQSNVSEESPDGAQ
ELKKPLIQAHPSKQVSNVNERKETFQSCNEGLKRSKTNFKDECQEDPNMGANLGEASGYD
SETSYVEDSCGPFSQGEILTTQQKDAMQNNLKKLQQEMAVLEAVLKQHGSQDCEFFPIDR
ELPHSGSEGTLGMEQMRQERENRDEQKSGTRLNSASVLSNLSGNVTRSPNSSSSSVRLLN
PRTAEATNSSVVAQNANKSCAQECTLKTSVCFPVPVLHNAAGKENATSPVVTNRKQMSIV
VSGLNRSEHLVVQKFARKTQSTLSNHITEGTTHVIMKTDKELVCERTLKYFLGIAGRKWV
VSYQWIIQSFKEGRILDEENFEVRGDVINGRNHQGPKRARQSLTEKIFKDFEICCYGPFT
DMTTEHLEWMVELCGASVVKQLHLFTHKTNSTAVVVVQPDAWVENMDCRAIQQKNNVAMV
TREWVLDSVACYQCQEFSAYLLS
NT seq 5292 nt   +upstreamnt  +downstreamnt
atggacttctcagtgattgctattggagatgtacaaaatgtgctttcagctatgcagaag
aacttggagtgcccaatatgcttggatgtggtaaaagagccagtttcaacaaaatgtgat
cacatattctgcaggttctgcatgttcaaactcctcagcaaaaagaaaacaggtgtggta
cagtgtcctctgtgcaagacagaagttaccaagagaagtctgaaagaaaattccagattt
aagcaactaattgaagggttgttggaaactatccatgcatttgagcttgacactggagta
aagtttttaagcagtcatcactttcataaaacatccacagaagccactgctgctgagttc
ccgtgtaaagaaagttctgtcatccaaagtaagggcttcagaaacaggaaaaaaagtgct
aaagaaaatggacaaggaaactgcaccttggaagctaatgtggatacacagcttacagat
accagggtcaaaaggtgtcccctaagaaacaaaacccagaaacgtgactctgaaaaaggg
atttatatagagtttggctctgattcatctgaagagctttttaaacaggcaagcagtact
gggttagaagacaaagaagtgcttcagacttcatctcaagaaaagctagaagaacttaag
agtgctgagaaggggaatgaatattcttgcaatacacagcctgacaagctgggtgctaaa
gaaataattctaccaaatgttgtaggtgaaagtgatttctcgaaggaaggcttgagcaag
aaaagcactcggagcatcactgaatatgccaaacctggtcaagcgcatacgactgaatac
cagagttctcctttaactgttcttgctgcagacctactcacagagcagtgtgacagaata
ggtaatgccagtccttcaaggaatggggacacatctttctctaagaacacagaagaaatg
gatgcagagcaaacttggtgcaatagtaaaagcaaagagtttgacttaaaagatagctca
gagagcaggctggataaaagcaaggaaatagatattgttgtacaaagtgtggaagctgtg
gaaatgtatgaaactgagaacgattctttcaatgaaaaagaacttcctctggagaaaccg
cttcagccagaggcacttcactctgctaccctgactcaagtctctaggaagagactgaag
cgaagcattcagaaagtcaatgaatggttttcaaaaagcaatgagattctgtcttccaat
tcttcccaggatgattctgctggagcaactgatgtttcaggtgaaggagacacatgttta
tcagataaagattcctgtatttcagaaaagactgaccctatgatagattccatggaaatt
gcagtggctgaaggaaacaagacatggtcaaaacaaacagatagcatcaaagacaaaata
tttgggaaaacatacaggagagagaggaagtcaaatcctgctattatcttgagagagatt
ttacctactacaaaaaaggaaggtgtggctactgatgagaagtgcttgaataattccagt
aaagacggactaaaacgaaaaaggaagactgcccgtgtcctgcaacctgaggatttcatc
aagaaaaaagatacaaaagaggcaggtgggtgtcctcaaagtgttaactggtgccctgga
gatgccaaaaagaaaagatgtgatgaaagttctgctgttaatgagagtctcctctccaag
aatagagaggacaatacactagcagaacatgaggaaggaggaggatccatatggaaaaaa
gctactgaaaaggtgactggcaagcactgtgatggggagctagaactgagtaaccgtgat
cagaaaagcactaaaaggagttctgcagcaaaaagatgcaggcgttctactagagccatg
tgtgctctacagttggtagtggatagaaactctgtttctcccgatccagctgagccacag
attgatagctatccaagcagtgaagaaccaaggaaagttgattccgagcacagacaagtc
aggcgcagcaggaggcttcagttaatttctgaagaaattacaaaagagacgggaaaagga
gtagtaattaagggagcaagaaagtatgacagtgatcaggaagggtgtttctttggagac
caaaggaatgtgttagttcacacgactgaatgcgaagacctgtgtgagcctcagggtatg
agttacaagccactcgctaatctgaagggtggtgatctggaagcaaatgaaatacagatt
agtgtaaagaattcatctgatgctgcagaaactggaaaaagtctcttcaatcctgcatct
tcatgtcagcattcaaattgtagttcctttgcacctgatgcaggttctcaagaaggggaa
atacaaggtagccctttcctcctacagtctccttcaatgactgttgtgcaaactgcttcc
cacccaactgaagagatcactgaatcatgtactactttcctccaggacagtggacatgat
acacagaatgttccggggaacttcagaactgaaaagctgcccgtggctaaaaatgtttcg
gaattgaccaaggaagctgaagacagtgagttagacacacagtatctgcgaaatatattt
aggcattcaaaacgcctatcgtttagcctttatcctactcccacaaaggcgtgcgcagta
gaagatgctgcttctgaacctttaaaggtatcatgtgctgatcaggtagaaaataagcat
agcaaatatttaaaaacagaaaacttgcaaggagagaaaacaactgctgaaagctcgagt
agggtttgtgagaaagagaagcttaagacctctgaatctgcttgtgttagtcctgtgact
tgctttgtcggcaacgctgaatgtatgcacacaggggaacatcaagatgtttcacaggct
gcaaatcaagggaatctgacaccagtaagagcgggtactgctaggactgaagacaaaaat
ggaccacaaaaaggagagcagggaaatgaaaaggcagtgacaaccgacatagggatagaa
agcgagctgagacagaatccaatcaaaaataagggaagccaaagcgatcagagtaatgca
gaagagcacattttcaaaagagctgatttaaacacagttggtgaaatatgcttcagtgca
gacagcaatcaagcaggaaaggcccaagttgttgacggcaaaggaccagtactacatttt
cagtccagatcaacgatttgccctgtgacttgtcagcaaaggcctgctgaattcagctgt
gcagtcactgggaaaaaaagtagcaaaagagaaagaaaacaagtaaaggggaatgaagaa
caagcaacccaaactgctagcacagggatgcccgagtgtttagttacagaggctccagaa
gaacctcttaaagggaatactgattttgcaggtttgtctgaaagccctgatggcttgctg
tgcttggatgatgatattgaagagaacaccagcttttctgaaactgataggaaagagaga
tctgctgtgtttgtaaaaggaagcgacaatgccctggcaaaagtagtacacaatagaaat
gttagttctcagccaggatctcaaggtattcaaagatctcgaagaaaagcgcagaaactg
cagtcttcagatgaagaatctagcgaggatgaagatttaccatgttttcaggcattaata
tttggcaaatcagtaagcacccctttccagatcaataagcaagtgacatctgtggtagag
gcttcacaaagccccatcacgttgcctcacaatggagctcatgatgacaataataggcag
aaaatgcgcgaggctgccctaagtaacgagtgtgtttcaccaagccaggactccgaatgc
tctgtcaacttattttcttcccagtccaacgtgtctgaagaatcacctgatggagcacaa
gagctgaagaaacctttaatacaagctcatccatccaaacaagtgagcaatgtgaatgag
aggaaagaaacttttcaaagttgtaatgaagggctgaagagaagcaaaactaacttcaaa
gatgaatgccaagaagacccaaacatgggagcaaacctaggtgaagcatctgggtatgac
agtgaaacaagttatgtagaagattcatgtggaccgttctctcagggtgaaatccttacc
acacagcagaaggatgctatgcaaaataacctaaaaaaacttcagcaagaaatggctgta
cttgaagcagtgctaaagcagcatggaagtcaggactgtgaatttttccctatcgatagg
gaactgccacattccggtagcgaaggaacacttggaatggaacaaatgagacaagaaaga
gaaaacagagatgagcagaagtctgggaccaggctaaacagtgcatctgtcttatcaaat
ctctctggaaatgtgaccaggagtccaaatagctcttcctcctccgtaaggctgcttaac
cctcgaactgcagaagcaacaaatagttctgttgtagctcagaatgctaataaaagctgt
gctcaagaatgtacattgaagacaagtgtgtgttttcctgtacctgttctgcacaatgca
gctgggaaagaaaatgctacaagtccagttgtgactaacagaaaacaaatgtcaattgtg
gtatcaggtctgaatcgaagtgaacatttggtggtccagaagtttgcaagaaaaactcag
agcactttatctaatcacattactgaaggaacaacccatgtcatcatgaaaacagataag
gagctggtgtgtgaacggaccctgaagtactttctgggtattgcaggaagaaaatgggta
gttagttatcagtggataattcagtcctttaaagaaggaaggatactggatgaggagaac
tttgaagttagaggagatgtaatcaatgggagaaaccaccaaggtcctaagagggctaga
cagtctctgactgaaaagatctttaaagactttgagatctgttgctatggaccattcact
gatatgactacagaacatctggaatggatggtggagctttgtggtgcctctgtagtgaag
cagcttcatctgttcacgcacaaaacaaattctactgctgtcgtagttgtgcagccagac
gcatgggtggaaaacatggattgtagagcaatccagcaaaagaacaacgttgccatggtg
actcgagagtgggtattagacagtgttgcttgctaccagtgccaggagttcagtgcttac
cttctctcctaa

DBGET integrated database retrieval system