Nipponia nippon (crested ibis): 104011661
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Entry
104011661 CDS
T05756
Symbol
APAF1
Name
(RefSeq) apoptotic protease-activating factor 1
KO
K02084
apoptotic protease-activating factor
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni04115
p53 signaling pathway
nni04210
Apoptosis
nni05164
Influenza A
nni05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
104011661 (APAF1)
04115 p53 signaling pathway
104011661 (APAF1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
104011661 (APAF1)
05168 Herpes simplex virus 1 infection
104011661 (APAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
APAF1_C
Beta-prop_EML_2
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
WD40_Gbeta
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
WHD_APAF1
NB-ARC
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_RIG_2nd
CARD
Beta-prop_Aladin
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
Beta-prop_WDR41
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
WD40_RFWD3
Beta-prop_HPS5
eIF2A
Beta-prop_Vps41
Beta-prop_NWD2_C
CARD_2
Beta-prop_NUP159_NUP214
Beta-prop_VPS8
PEP5_VPS11_N
Ge1_WD40
WD40_like
Tricorn_2nd
Beta-prop_DCAF4
Beta-prop_RSE1_2nd
Beta-prop_ACSF4
Beta-prop_DCAF12
Beta-prop_WDR11_2nd
WDR54
AAA_16
AAA_22
WHD_Dark
nSTAND6
DUF2415
LRRC37
Motif
Other DBs
NCBI-GeneID:
104011661
NCBI-ProteinID:
XP_009462221
UniProt:
A0A091V063
LinkDB
All DBs
Position
Unknown
AA seq
1249 aa
AA seq
DB search
MDVKSRNYLLMNRQALEKDIKTSYIMDRMISDEVLTLQEEEKVKQQNTQKERAAMLINII
LTKDNNSYRSFYNALLHEGYRDLAALLQDGIPAISSGNRKSSMDGMTSYVKMILCEGGVP
QRPVVFVTRPKLVDAIKQKLCCLGSDPGWVTVYGMAGCGKTVLTAEALRDHQLLEDYFPG
GVHWISVGKQDKAGLLIKLQNLCSRLEHDSTLSQRPPLNIEEAKDRLRLLMLRKYPRSLL
ILDDIWDSWVLKAFDNQCQVLITSRDRSVTDAVAGNKYEVHVESGLAHEKGLEILSLFVN
MKISELPEQANCLVRECKGSPLVISLIGALLRDFPSRWEYYLKQLQNKQFKRIRKSSSYD
YEALDEAMSISVEQLNDNYKDYYKDLSILPKDVKVPTKVLCILWDMETEEVEDILQEFVN
KSLLFCDRNGKSFHYYLHDLQLDFLTEKNHNQLQELHKNIVKQYKKYYKLSTPVPSQEDC
MYWYNFLAYHMAGANMQKELHDLMFSLDWIKAKTELLGPAHLIHEYVEYSSILDQKNSTV
RENFQEFLSLNGHLLGRQPFPDIIQLGLCQPETSEVYQQAKLHAQREKGAFYLEWINKKS
LKNLYRLVVRPHRDAVYHACFSKDRQRIASCGADKTLQVFKAESGERLLEISAHDDEILC
CAFSADGEFVATCSADKKVKIWNSRTGQCRCVYEEHTEQVNCCQFNNRSGQYLLATCSND
TFIKLWDLNKKYCRNTMMGHVNSVSHCRFSPNDEYVASCSTDGTVKLWEARSANELKSIE
IKDFFKNADESPDDVDVLVKCCSWSRNDDMILVVAKNKLLLFDVKTCNLLTEVIVSHHST
IQYCDFCPGDELVAVALSHCSVELWNIKSLSKVAYCRGHMSWVHCVTFSPDGSLFLTSSD
DQTIRIWETRKVCMSSDAVLKSELDVVFHNGEVMILAIYNQKHLQLINGNTDSVVMHTAA
QESPISCCCLSGDLKFAAFGQESGTIKVLQLSDGKVLKSQEAYRMSVQHCRFTSDCQTLI
SSAHDSVIQVWNWQLNECVFLRGHKEAIKDFRLLEDSKLLSWSFDGTVKVWNITAGNVEK
DFACHGGAVLSCAVSPDGSKFSSTSADKTAKIWSFESSSVLHELKGHEACVRCCTFSPNN
KLLATGDDKGEIRIWDILTGALLHFCSPVTVDEEEPTHGGWVTDVSFSPDSEMLVSSGGY
LKWWNVTTGESLQTFYTNGTNLKSIHVSPNFEVYVTVDNLGILYVLQKL
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgaagagtaggaattatttacttatgaatcgccaagcattggaaaaagacatc
aagacctcttatattatggatcgtatgatttctgacgaagtactgacattacaggaggag
gagaaagtgaaacaacagaatacacagaaggaacgagcagctatgctaataaacattatt
cttacaaaagataataattcatatagatctttttataatgcactacttcatgaagggtac
agagatcttgctgcgcttcttcaggacggcatccctgccatctcctcgggtaacagaaag
agttcaatggatggaatgacttcatatgttaagatgattctctgcgaaggaggtgtacca
cagagaccggttgtgtttgtcactcggccaaaactggtagatgctattaaacagaaactg
tgctgcttgggaagtgatccaggctgggtcacagtttatggaatggcaggttgtgggaag
actgttttaacagcagaagctttaagggatcatcagctcttggaagattactttccagga
ggagttcactggatctctgttggaaaacaggacaaagcagggctcctaataaaacttcag
aatctctgtagtagattagaacatgactctactctttcacaaaggccaccacttaacatt
gaggaggctaaagatcgtcttcgtttgctgatgctacgcaaatatcccagatctcttttg
atcctggatgacatttgggattcctgggtattaaaagcatttgataatcaatgtcaggtt
cttatcaccagcagggacaggagtgtaacagatgctgtggctggcaataaatatgaggtt
catgttgaaagtggactagcacatgagaaaggactggagattttatccctatttgtgaat
atgaaaatatcagaactgccagaacaagctaactgccttgtaagggaatgcaaaggttct
cctcttgtgatatccttgataggtgcattgttacgagacttccctagtcgttgggaatac
tatctcaaacagctgcagaataagcagtttaaaagaataagaaagtcgtcatcttatgat
tatgaagcccttgatgaagcaatgtccataagtgttgagcaactgaacgacaattataaa
gactactataaagacctctctatcctcccaaaagatgttaaagtacctactaaggttctc
tgtattctttgggatatggaaactgaagaagttgaagatatactacaggaatttgttaac
aaatcgctattgttctgtgatcgtaatgggaagtcattccattattatttacatgatctt
caacttgactttcttacagagaagaatcacaaccagcttcaggagctacataaaaacata
gtaaaacagtacaagaaatattacaaacttagtacgcctgttccatctcaagaggattgc
atgtactggtataactttcttgcgtatcacatggctggtgccaacatgcagaaggaactc
catgatcttatgttttctctagattggattaaagctaaaacggaattgctagggcctgct
catctgattcatgaatatgtagaatatagttcaatcctggatcaaaagaatagcacagta
cgtgagaacttccaggaatttctgtctttaaatgggcaccttcttggacggcaaccgttt
cctgacattatacagctgggtctttgccaaccagagacatcagaggtgtatcaacaagcc
aagctacatgctcaaagagaaaaaggagcattttatttggaatggataaacaaaaaatcc
ttgaaaaacctctaccgtctggttgttcgtccacatagagatgcagtttatcatgcctgc
ttttctaaggatagacaaagaatagcatcatgtggagctgataaaacacttcaggtgttt
aaagcagaaagtggagagagactcctggaaataagtgcccatgatgatgaaatactttgt
tgcgctttctctgcagatggtgaatttgtagcaacttgttcagctgataaaaaagtgaag
atctggaattcaagaacaggccagtgtaggtgtgtatatgaagaacacacagagcaggtc
aattgctgccagttcaataacagaagtggtcagtatcttttagccacctgctcaaatgac
actttcatcaaactttgggatttgaacaaaaagtattgtagaaatacgatgatgggtcat
gtaaattccgtcagtcactgtagattttcaccaaatgatgaatatgttgctagctgctca
acagatggaacagtaaagctttgggaagcgcgctcagcaaatgaactgaaaagtattgag
ataaaagatttcttcaaaaatgcagatgagtcaccggatgatgtggatgttttagtaaaa
tgttgctcttggtccagaaacgatgacatgattttggtagttgccaaaaataagcttttg
ctttttgatgttaaaacatgcaatttgttaactgaagtcattgtaagtcatcacagtaca
atccaatactgtgacttttgtcctggtgatgagttagtagcagttgctttgtctcactgt
tctgttgagttatggaatattaaatctttatcgaaagtagcatattgcaggggacacatg
agctgggttcactgtgtgacattttcaccagatggatctttatttctaacatcatctgat
gaccagacaatacgcatttgggaaacaaggaaggtgtgcatgtcttctgatgcagtgcta
aaaagtgaactagatgttgtatttcacaatggtgaagtgatgattttagcaatttacaat
cagaagcatttacaacttatcaatggaaatacagacagtgttgttatgcatacagcagct
caagaatcccccatttcctgctgttgcttaagtggagatcttaaatttgcagcttttgga
caggagagtggaacaataaaggtattacagttgtcggatgggaaagttctgaagtcccag
gaggcctacaggatgtctgtgcagcattgtcgatttacctctgactgtcagactctcatt
tcaagtgctcatgattcagttatacaggtatggaattggcagttgaacgaatgtgtattt
ctaagagggcacaaggaagcaatcaaggattttagacttctggaagattcaaaacttctt
tcttggtcgtttgatggaaccgttaaggtttggaatatcactgctggaaacgtagaaaaa
gattttgcttgccatggaggtgctgttctttcctgtgctgtttcccctgatggtagtaaa
ttttcatctacctctgctgacaaaactgcaaagatatggagctttgaaagttcatctgtt
cttcatgagctgaaaggtcatgaagcctgtgtgcggtgctgtactttctctcctaataac
aagttattggccactggagatgacaaaggagaaataaggatttgggatattttaacaggt
gcattacttcacttctgctccccagttacagtagatgaagaagaaccaacacatggtggc
tgggtaacagacgtctccttttctcctgacagtgaaatgcttgtgtcatctggaggctat
cttaagtggtggaacgtaactactggagaatccttacaaaccttctacacaaatggaacg
aacctcaagtcgatacatgtgtcccctaatttcgaagtgtatgtgactgttgataatctt
ggcattctgtatgtattacagaagttgtga
DBGET
integrated database retrieval system
