Nipponia nippon (crested ibis): 104012509
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Entry
104012509 CDS
T05756
Symbol
PRDM6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni00310
Lysine degradation
nni01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
104012509 (PRDM6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nni03000
]
104012509 (PRDM6)
03036 Chromosome and associated proteins [BR:
nni03036
]
104012509 (PRDM6)
Enzymes [BR:
nni01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
104012509 (PRDM6)
Transcription factors [BR:
nni03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
104012509 (PRDM6)
Chromosome and associated proteins [BR:
nni03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
104012509 (PRDM6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-H2C2_2
zf-C2H2_4
SET
Zap1_zf1
zf-C2H2_11
zf-C2H2_jaz
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
104012509
NCBI-ProteinID:
XP_009463170
LinkDB
All DBs
Position
Unknown
AA seq
480 aa
AA seq
DB search
MVPVPCGGRGVGAGSRVASQGAQPRHTGAGVTCNGLSSPALDYSQPMCTGGFLEGPPTRS
RCTAEELDYYLYGQQRMDIIPLNQHTSDPNNRCDMCADNRNGECPMHGPLHSLRRLGGTS
SAPEWLRDLPREVCLCTSTVPGLAYGICAAQRIQQGTWIGPFQGVLLLPEKVQAGAIRNT
QHLWEIYDQDGTLQHFIDGGEPSKSSWMRYIRCARHCGEQNLTVVQYRSNIFYRACIDIP
RGTELLVWYNDSYTSFFGIPLQCIAQDENLNVPSTVMEAMSRQDTLQPFNKSSKISPATP
QRSIVFPQTPCSRNFSLLDKSGSIESGFNQISVKNQRVLASPTSTSQLNSEFSDWHLWKC
GQCFKTFTQRILLQMHVCTQNPDRPYQCGHCSQSFSQPSELRNHVVTHSSDRPFKCGYCG
RAFAGATTLNNHIRTHTGEKPFKCERCERSFTQATQLSRHQRMPNECKPITESTESIEVD
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggtgcccgttccttgtggggggcgcggcgtgggggcgggaagccgtgtggcctcccag
ggggctcagcctcgccacacaggggctggagttacctgcaacgggctcagtagccctgct
ttggactacagccagcccatgtgcacgggagggttccttgaaggtcccccaactcggtcc
cgctgcacggccgaggagctggactactacctgtacgggcagcagcgcatggacatcatc
cccttgaaccagcacaccagtgaccccaacaaccgatgtgacatgtgtgctgataaccgc
aacggcgagtgccctatgcacgggcccctccactccctgcgccggctggggggcaccagc
agtgctccagagtggctccgggacctgccccgggaagtgtgtctgtgcaccagcacagtg
cctggcctggcctacggcatttgtgcggcacagaggatccagcagggtacctggattggg
cctttccagggagtcctgctcttgccagagaaggttcaagcaggagccatcaggaacact
cagcatctctgggaaatatatgaccaagatgggacactgcagcactttattgatggtgga
gaacccagtaagtcaagctggatgaggtatatccgatgtgcaaggcactgcggggaacag
aacttaacagtggttcagtacaggtcaaatatattctaccgggcttgtatagatatcccc
aggggcaccgagctgttggtgtggtacaatgacagctacacatctttctttggaatccct
ctccagtgcattgcacaagacgaaaatttgaatgtcccttcgactgtaatggaggccatg
tccagacaagacaccctacagccatttaataaaagtagcaaaatatcccctgccactcca
cagcgatccatagtatttccacagactccgtgtagcagaaatttttctctcctggataag
tctgggtccatcgagtcaggatttaaccagatcagtgtcaaaaaccaacgagttcttgca
agcccaacttcaacaagccaactaaattctgagttcagtgactggcatctttggaaatgt
gggcaatgctttaagactttcacccagcggatcctcttacagatgcatgtgtgtacgcag
aaccctgacaggccctaccagtgtggtcactgctcccagtctttctcccaaccttcagag
ctgaggaaccatgtagttacgcactccagcgacaggcctttcaagtgtggctactgcggt
cgtgcctttgctggtgccacaacactcaacaaccacatccggacacacactggggaaaag
cccttcaagtgcgagaggtgtgagaggagcttcacacaagccacccagctgagtcgacac
cagaggatgcccaatgagtgcaagccaataacagagagcacagaatcaattgaagtggat
taa
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integrated database retrieval system
