Nipponia nippon (crested ibis): 104013372
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Entry
104013372 CDS
T05756
Symbol
TDG
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
104013372 (TDG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nni03400
]
104013372 (TDG)
Enzymes [BR:
nni01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
104013372 (TDG)
DNA repair and recombination proteins [BR:
nni03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
104013372 (TDG)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
GAGA_bind
Motif
Other DBs
NCBI-GeneID:
104013372
NCBI-ProteinID:
XP_009464135
LinkDB
All DBs
Position
Unknown
AA seq
407 aa
AA seq
DB search
MDKKAAVYYAYLQQAQAFYAFPFHQMMTAAPSMEIMTEQPTLEGIPEPNIAQEPPKEVKK
GGRKRKAKATEPKQPKKPAAKKEKSAKSKGKQEKITDTFKVKRKVDRFNGVSEAELLTKT
LPDILTFDLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFMSGLSNEQLNHMDDHTLPH
KYGIGFTNMVERTTPGSKDLSSKEFREGGRILMQKLQKYKPRIAAFNGKCIYEIFSKEVF
GIKVKNLEFGLQPHKVPDTETLCYVMPSSSARCAQFPRAQDKVHYYIKLKDLRDQLKGIA
PNTEVQEVQYTFDLQLAQEDAKKMAVKEEKYDPGYEAAYGGAYCDRAPYESEQCSFSSNG
TAGSNPQYCEGSSFGEVPNGQWMTQSFADQIPEFSAGMTQEEEGSSA
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggacaagaaggcagctgtatactacgcgtatcttcagcaagctcaagctttctacgca
tttccgttccatcaaatgatgactgcagcacctagcatggagatcatgactgagcagccg
actctagagggcattccagagccaaacattgctcaggagcctccaaaagaagttaaaaaa
ggaggaaggaaaagaaaagccaaagcaactgagccaaagcaacccaaaaagcctgctgct
aaaaaggaaaaatcagccaagtcaaaaggcaaacaagaaaagatcacagatacttttaaa
gtcaaaagaaaagtggaccgttttaatggtgtatctgaagctgaacttctaaccaagact
ttacctgatattttgacctttgatctggacattgtaataattggcataaaccctggcttg
atggcagcttacaaaggacatcattaccctggacctggaaaccatttttggaagtgtctg
ttcatgtctggtctaagtaacgaacagctgaaccacatggatgaccacaccttgccacat
aaatatgggattggatttacaaacatggttgaaaggacaacacctggaagcaaagacctc
tccagcaaagagtttcgggaaggagggcgaattctgatgcagaagttacaaaagtataaa
cctcgtatagcagctttcaatggaaaatgtatttatgaaatttttagtaaagaagttttt
ggaataaaagttaagaacttggaatttggactgcagccacacaaggtgccagatacagaa
actctctgctacgttatgccatcatccagtgcaagatgcgctcagtttcctcgtgcgcaa
gacaaagttcattattacataaagctgaaagacttaagggatcaactgaaaggcatcgca
ccaaacacagaggtgcaggaggtgcagtacacatttgacttgcaacttgcacaagaggat
gctaaaaagatggctgtcaaagaagaaaaatacgatccgggttatgaagcagcgtatgga
ggagcttactgtgatcgtgcaccgtacgaaagtgaacagtgcagtttctcttcaaatgga
actgcaggaagcaatccacagtactgtgaggggtcgtccttcggggaagttcctaatgga
caatggatgacacagtcctttgcagaccagattccagagttcagtgctggtatgacgcag
gaagaagagggaagcagcgcgtaa
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integrated database retrieval system
