Nipponia nippon (crested ibis): 104014390
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Entry
104014390 CDS
T05756
Symbol
RFNG
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni00514
Other types of O-glycan biosynthesis
nni04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
104014390 (RFNG)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
104014390 (RFNG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
nni01003
]
104014390 (RFNG)
Enzymes [BR:
nni01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
104014390 (RFNG)
Glycosyltransferases [BR:
nni01003
]
Glycan extension
O-Glycan
104014390 (RFNG)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
104014390
NCBI-ProteinID:
XP_009465303
LinkDB
All DBs
Position
Unknown
AA seq
285 aa
AA seq
DB search
GRAGAAGGPARESLELKDIFIAVKTTRKYHRSRLDLLLQTWISRARGQTFIFTDWEDREL
RLKAGDHMINTNCSAVHTRQALCCKMSVEYDKFLESGQKWFCHVDDDNYVNPRTLLRLLS
AFSHSQDVYVGRPSLDHPIEAADHVQSDGSKTTVKFWFATGGAGFCISRGLALKMSPWAS
LGNFISTAERVRLPDDCTIGYIIEGLLEVKLLHSPLFHSHLENLQRLQGESVLQQVTLSY
GDPENKHNVVSVGGVFGLQQDPTRFKSVHCLLYPDTIWCPAKKMS
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
ggccgcgccggggccgccgggggcccggccagggagagcctggagctgaaggacatcttc
atcgcggtgaagaccaccaggaagtaccacaggagccggctggacctgctgctccagacc
tggatctcccgggcgaggggacagacgtttatattcacagactgggaggatcgggagcta
cgcctgaaagcaggggatcatatgatcaacaccaactgttctgctgtccatacccggcaa
gctctctgctgcaagatgtctgtggaatatgataaattcctggaatctgggcaaaaatgg
ttttgccatgtggacgatgacaactacgtgaaccctcggaccctcctgcgtctcttatct
gccttctcccacagccaggatgtctatgtggggcgacccagtctggaccatcccattgaa
gcagctgaccatgtccagagcgatggatcaaagacaactgtgaaattctggtttgccaca
ggtggagcagggttctgtatcagcagaggtcttgccctgaagatgagtccctgggccagc
ctaggtaatttcatcagtactgcagaaagagtgcgtcttcctgacgactgcactattggc
tacatcatcgaagggctgctggaggtgaagctgctgcacagcccgttgttccattcccat
ctggaaaatctgcagagactacaaggcgagtctgtgctgcagcaggtaaccctaagttat
ggggaccctgagaacaaacacaatgttgtgagtgtgggaggagtgtttggccttcagcaa
gatccaacccgatttaaatctgtccattgtctgctctatcctgacactatttggtgccct
gctaagaagatgtcataa
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integrated database retrieval system
