Nipponia nippon (crested ibis): 104015434
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Entry
104015434 CDS
T05756
Symbol
PTPRF
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
nni
Nipponia nippon (crested ibis)
Pathway
nni04514
Cell adhesion molecules
nni04520
Adherens junction
nni04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
104015434 (PTPRF)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
104015434 (PTPRF)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
104015434 (PTPRF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nni01009
]
104015434 (PTPRF)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nni04515
]
104015434 (PTPRF)
Enzymes [BR:
nni01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
104015434 (PTPRF)
Protein phosphatases and associated proteins [BR:
nni01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
104015434 (PTPRF)
Cell adhesion molecules [BR:
nni04515
]
Immunoglobulin superfamily
Type II RPTP family
104015434 (PTPRF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
ig
fn3_2
Interfer-bind
PTP-SAK
Tc-R-P
V-set
DSPc
Y_phosphatase3
C2-set_2
PTPlike_phytase
PTP-NADK
Fn3_PTPRU
Insulin_TMD
DUF3377
ICAM_N
TMEM154
Motif
Other DBs
NCBI-GeneID:
104015434
NCBI-ProteinID:
XP_009466458
LinkDB
All DBs
Position
Unknown
AA seq
1914 aa
AA seq
DB search
MVPNFCVPVLTVTAAILCCLMPPLAGADSKPTFMKAPEDQIGISGGVASFVCQATGEPKP
RITWMKKGKKVSSQRFEVIEFDDGSGSVLRIQPLRVHRDEAIYECTATNSVGEINTSAKL
TVLEEDHLPAGFPTIDMGPQLKVVEKARTATMLCAASGNPDPEISWFKDFLPVDTATSNG
RIKQLRSVSLGGTPIRGALQIENSEESDQGKYECVATNSAGTRYSAPANLYVRDQREVRR
VAPRFSIPPSNHEVMPGGSVNLTCVAVGAPMPYVKWMAGVEELTKEDEMPVGRNVLELNN
IMQSANYTCVAISSLGMIEATAQITVKALPKPPTEPLATETTATSVTLTWDSGNSDPISY
YVIQYKPKSLEGQFQEVDGVATTRYSIGGLSPFSEYEFRVIAVNNIGRGPPSELVEARTG
EQAPSSPPLKVQARMLSASTMLVQWEQPEEPNGQIRGYRVYYTTDPHLPLSMWQKHNTDD
SHLTTVGSLITGTTYSIRVLAFTSVGDGPPSDIIQVKTQQGVPAQPADFQAEAESDTRIL
LTWLPASQERITKYELLYWEGEDGTQQKVEFDPTSSYAVEGLKPDTLYKFRLGARSELGV
GVYTPTIEARTAQSTPSAPPQEVECVSTSSTTIRVSWVPPPAQSRNGVITQYSIAYQAVE
GDDNTKHVVDGIGREHSSWEIKDLEKWTEYKVWVRAHTDVGPGPESIPVHVRTDEDVPSA
PPRKVEVESVNSTAIRVSWKLPISNKQHGQIRGYQVTYVKLENNEPRGQPVIKDVMLSEA
QWRAEDSVDHETVIGGLLPETTYSITVAAYTTKGDGARSKPKVITTTGAVPGKPTMMIST
TAMNTALIQWHPPKEMVGELLGYRLQYRRLDEEKMNTIDFGKRDHHYTVTNLHKGATYLF
KLSAKNRAGPGEEFEKEITTAEDVPSGFPQNLRVVGLTTSTTEVAWDPPVLAERNGKIVN
YTVVYRDINSQQDLVNITKDTSITLTNLKPDTTYDIKVRARTNKGVGPLSPSIQSRTMPV
EQVFAKNFRVNAVMKTSVLLSWEVPDSYKSAVPFKILYNSQSVEVDGHSMKKLISDLQPD
TDYSFVLMNRGSSAGGLQHLVSIRTAPDVLQSKPIATNKYIQEGKFTLTLPKVQTTVPVR
WYYIVVVPADQSTSSPTARWRTPDEMELDQLLEAISQGSQSRRQRRQADRLKPYIAAQVD
VLPETFTLGDEKNYKGFYNKPLSQDLSYRCFVLASLEDGDTKRYAASPYSDEIVMEVASA
KQQDEPEMLWVMGPVLAVILIIIIVIAILLFKRKRAHSPSSKDEHSIGLKDSLLAHSSDP
VEMRRLNYQTPGMRDHPPIPVTDLADNIDRLKANDGLKFSQEYESIDPGQQFTWENSNLE
VNKPKNRYANVIAYDHSRVILTSIDGVPGSDYINANYIDGYRKQNAYIATQGPLPETLSD
FWRMVWEQRTATIVMMTRLEEKSRVKCDQYWPSRGTETYGMIQVTLLDTVELATYTVRTF
ALYKNGSSEKRELRQFQFMAWPDHGVPEYPTPILAFLRRVKACNPPDAGPMVVHCSAGVG
RTGCFIVIDAMLERMKHEKTVDIYGHVTCMRSQRNYMVQTEDQYIFIHEALLEAAACGNT
EVPARNLFAHIQKLTQVPPGESVTAMELEFKLLANSKAHTSRFISANLPCNKFKNRLVNI
MPYELTRVCLQPIRGVEGSDYINASFIDGYRQQKAYIATQGPLAETTEDFWRMLWEHNST
IVVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSR
TIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLS
IVLERMRYEGVVDMFQTVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSFDHYAT
NT seq
5745 nt
NT seq
+upstream
nt +downstream
nt
atggtgcctaacttctgcgtcccagtactcactgtgacagcagccatcctctgctgcctg
atgccgcctttagcaggagcggacagcaagccaacgtttatgaaagctcctgaagatcag
attgggatttctggaggagtagcctcttttgtgtgtcaggcaacaggagagcccaaacct
cgtatcacatggatgaagaaggggaagaaagtcagttctcagcggtttgaggttattgag
tttgatgatggatcaggatcagttctgcggatacagcccctgcgtgttcatcgagatgaa
gctatctatgagtgcacagcaaccaatagtgttggggaaataaacacgagtgccaaatta
acagtgttagaagaagaccacctcccagctggcttcccgaccattgacatgggcccacag
ctgaaggtggtggaaaaggcccgcacagccacaatgctctgtgctgccagcggtaaccct
gatcctgaaatctcctggttcaaggacttcctgcctgtcgacactgcaactagcaatggg
cgaatcaagcagctccgctcggtatctctgggtggtacaccgatcagaggcgctctgcaa
atagagaacagcgaggagtcggaccagggcaaatatgaatgtgttgcaaccaacagtgca
ggaacccgctactctgccccagctaacctttacgttcgagatcagcgagaagtgcggcgt
gttgctcctcgattctctatccctccgagcaaccacgaggtgatgcctggagggagcgtg
aacctcacgtgcgtggcagtaggtgctccgatgccctacgtgaagtggatggctggtgtg
gaggaactgaccaaagaggatgagatgcccgtcggcaggaacgtcctggagctgaacaac
atcatgcagtctgccaactacacctgcgtggccatctcctccctcggtatgatcgaagcc
acagcccagatcactgtcaaagcactgccaaaacctccaacagagccattagcgactgaa
acgacagctaccagcgtgaccctcacctgggattcgggcaactccgaccccatttcatat
tatgtcatccagtacaagcccaaatccttggagggtcagttccaggaggtggatggtgtg
gcaacaacccgctatagcataggtgggctcagccccttctcggagtatgagttccgggtc
atcgcagtcaataacattggcaggggtcccccgagtgagctggtcgaggcccggacagga
gagcaagctccttcaagtccacccctcaaagtccaggcacggatgctgagtgccagcacc
atgctggtccagtgggaacagccggaggagccaaacggacagatccgagggtaccgcgtt
tattataccaccgacccgcatctgcctttgagcatgtggcagaaacacaacactgacgac
agccacctcaccaccgtggggagcctcatcacagggaccacgtacagcatccgcgtcctg
gcctttacttcggtgggtgacgggcccccatcggacatcatccaggtcaaaacgcagcaa
ggggttcccgcccagccagctgacttccaggcagaagcagagtctgatacccgcatcctg
ttgacgtggctgcccgcctctcaggaacgcattaccaaatacgagctgctgtactgggaa
ggggaggatggcacccagcaaaaagtggagtttgacccaacatcctcatatgctgtggaa
ggtctcaaaccagacacactgtataagttccgtctgggtgcccgctcagagctgggggta
ggagtctacaccccgacgattgaagccagaactgcccaatccaccccctccgccccaccc
caagaagtcgagtgtgtaagcaccagctccactaccatccgggtaagttgggtgccaccg
cccgcccagagccgcaatggggtcatcacccagtactccattgcgtaccaggcagtagaa
ggagatgacaacaccaagcatgtggtggatggcattggacgggagcactccagctgggag
atcaaggacctggagaaatggaccgagtacaaggtgtgggtaagggctcacaccgatgtg
gggccaggaccggagagcatccctgtgcacgtgcgcactgatgaggatgtgcccagtgcc
ccaccgcgaaaggtggaggtagagtctgtgaattcgactgccatccgggtgagctggaag
ctgcccatctccaacaagcagcacgggcagatccgcgggtaccaggttacatacgtgaag
ctggaaaacaacgagccccgagggcagccagtgatcaaggacgtcatgctgtcggaagca
cagtggagagctgaggactccgtcgaccatgagacggtcattggaggcctgctgccagaa
accacctactccatcacagtcgctgcctacaccaccaagggagatggtgcccgcagcaag
ccgaaagtcatcaccaccacaggggcagtcccagggaagcccaccatgatgattagcacg
acagccatgaacacagccctcatccagtggcacccacccaaggagatggtaggggagctg
ctgggttaccggctgcagtacagacgtcttgatgaggaaaagatgaacacgatagacttc
gggaagagagaccatcactacactgtgaccaacctgcacaagggggccacatacctcttc
aaactgtctgccaagaacagagctggcccaggagaggagtttgagaaggagatcactact
gcagaagacgtgccaagtggcttcccacagaacctgcgtgtggtgggtctcaccacttcc
acgacagaggttgcatgggaccctccagtcttggcagaaagaaatggcaagatcgtcaac
tacacagtggtatacagggacataaatagccagcaggacctggttaacatcaccaaggac
acaagtatcactttgacgaatttgaagcccgataccacttacgacatcaaagtgagggcc
cgcaccaataagggggttgggccactcagccccagcatccagtcccggaccatgcctgtt
gagcaagtgtttgctaagaacttccgtgtcaatgccgtcatgaaaacatctgtgttgctg
agctgggaagtgcctgactcctataaatctgcagtgccttttaagattctgtacaacagc
cagagtgtggaggtggacggccactcgatgaagaaactcataagtgacctccagccagac
acggactattcttttgtgctaatgaaccgtgggagcagtgctgggggactccagcacctc
gtctcaatccgcaccgctcctgacgtcttgcaaagcaaacccattgccacaaacaagtac
atacaggaaggaaaattcacgctcacccttcccaaagtccagaccactgtgccggttagg
tggtactacatcgtggttgtgccagcggatcagagcaccagcagcccgactgctcggtgg
cggacacctgatgagatggagctggaccagctgctggaggccataagccaagggagtcag
agcaggcgccagcgacgccaagcagacagactcaagccctacattgctgctcaagtggat
gtgctgcccgagaccttcaccctgggggacgagaagaactacaaaggtttctacaacaag
cccctgtctcaagacctgagctatcgctgcttcgtgctggcctcactagaggatggagac
acgaagagatacgcagccagcccctactcggatgagatcgtgatggaagtggcttcagca
aagcagcaggatgaaccagagatgctgtgggtgatgggacctgtcctggccgtgatatta
atcatcatcattgtcattgctatactcctcttcaaaaggaaaagggcacactccccctct
tccaaggatgagcactccatcggcctgaaggactcgctcttggcccactcctctgacccg
gtcgagatgaggcggctcaactaccagactccaggcatgcgcgaccacccccccatcccc
gtgaccgacctcgccgacaacatcgacaggctgaaagccaacgacgggctgaagttctcc
caggagtacgagtccattgatccagggcagcagttcacctgggagaactccaacctggaa
gtgaataaaccgaaaaaccgctatgcaaacgtgatcgcctatgaccactcacgtgtcatc
ctgacctccatcgatggggtcccaggcagtgattacatcaatgccaattacattgatggg
tatcggaagcagaacgcctacattgccacgcagggaccgctgccagaaaccctcagcgac
ttctggaggatggtgtgggaacagagaacggcaactatagtcatgatgaccaggctggag
gagaagtccagggtaaagtgtgaccagtactggccaagccggggtacagaaacctatggg
atgatccaggtgaccctgctggacacagtcgagctggcgacctacaccgtccgcactttt
gcactgtacaagaatggctccagtgagaagcgagagctgcgacagttccagttcatggct
tggcccgatcacggggtaccagaataccccaccccaatcctagctttcctgcgacgggtc
aaggcctgtaacccaccggacgctgggcccatggttgtccattgcagtgccggtgtgggc
cgaactggttgcttcatcgtcattgatgccatgctggagcggatgaagcatgagaagacc
gtggacatctatggccacgtaacgtgcatgcgctctcagcgcaactacatggtgcagaca
gaggaccagtacatcttcatccacgaggccttgctggaggcagccgcatgtggcaatacc
gaggtgcctgcacgcaacctctttgctcacatccagaagctgacccaggtgccaccaggc
gagagcgttactgcaatggagctggaattcaagctgctggccaactctaaagcacatacc
tcacgtttcatcagtgccaacctcccgtgcaacaaattcaagaaccgcctcgtgaacatc
atgccatacgagctgacaagagtctgtctgcagcccatccggggtgttgagggctccgat
tacatcaatgccagcttcatagatgggtacaggcagcagaaggcctacatcgccacgcag
ggaccgctggccgagaccacagaggatttctggcggatgctctgggagcacaactccacc
atcgtggtgatgttgacaaagctgcgcgagatgggccgggagaaatgccatcagtactgg
cccgcggagcgctctgcccggtaccagtacttcgtggtggaccccatggcagagtacaac
atgccgcagtacatcctccgggaattcaaagtgacggatgccagggatggccagtcacgg
accatccgccagttccagttcacagactggcctgagcagggagtgccaaagacgggagag
ggcttcatcgacttcatcgggcaggtgcacaagaccaaggaacagtttgggcaggacggg
cccatcacagtgcactgcagtgctggggtcgggcgcaccggcgtgtttatcacactcagc
atcgtgctggagaggatgcgctacgagggggtggtggacatgttccagacggtgaagacc
ttgcggacgcagcggccagccatggtgcagacagaggaccagtaccagctgtgctacaga
gcggcactggagtatctcggcagcttcgaccactatgcaacgtaa
DBGET
integrated database retrieval system
