Nipponia nippon (crested ibis): 104016577
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Entry
104016577 CDS
T05756
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin gamma-C3-like
KO
K16497
protocadherin gamma subfamily C
Organism
nni
Nipponia nippon (crested ibis)
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nni04515
]
104016577
Cell adhesion molecules [BR:
nni04515
]
Cadherins
Protocadherins
104016577
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_tail
Cadherin_C_2
Cadherin_CELSR2_9th
RET_CLD1
Motif
Other DBs
NCBI-GeneID:
104016577
NCBI-ProteinID:
XP_009467759
LinkDB
All DBs
Position
Unknown
AA seq
935 aa
AA seq
DB search
MNGVAVRSRGVTTGQVLSLLLLLGVSDWVSAAIRYAIPEEARRGSAVGNVVADLALDLGR
LPARRLRVVSGGNKKYFGVDLTSGALLVSERIDREELCGALSPCSLSFEIVVENPLELYS
GAVEIQDINDNDPVFPSSQARLEISESVAAGARFPLESAQDPDVGINSLQTYQLSANPHF
ALDVQTRVDGSKYAELVLEKELDREEQRELHLVLTALDGGSPPRSAHVQIHIDVVDANDN
SPVFNQSTYKASVTENTPSGTLVTRISAYDLDDGPNGDIVYSFSSHTPAKVRELFALDSA
TGELRVKGQLDYEETKLYEIYLQAKDKGVVPGVAHCKVLVEVVDVNDNAPEVTVTSVYSP
VPEDAASGTVVALLSVTDLDSHDNGLVNCFISPGIPFTLSSSLKNYYTLKTKAALDREKA
SEYNITITARDSGSPPLSAVKQILVQVSDVNDNAPKSSQDSYDVYVLENNMPGIPILNVS
ATDPDLGRNAHLSYTILQGDPTVGHLFSINRENGTLYLLTSLDHEDQVEFSMMVQVQDGG
SLPLATNVSVSVFVTDLNDNAPTVLYPHPNTTATYTDVVAPGTPAGHMVTKVVAVDADAG
YNAWISYTLLQATDPSLFSVGLHSGEIFTARQLQEDDAPQHTLVXLLKDHGEPVLSTSAT
VSISVAEMVKEVLTDLTDVAPANDPRRHVTFYLTLAVILVSAAFFITMLSLGIFKCYKWR
QSKELFNSSRSTLYRTPGPFHHIDAVRGGFTPPNFYHQVYLTTDSRQSDILCKKPFTSSP
LGSRQSTMRNGEPGLYHQIVGTASRLPTPAEQAQPNTDWRFSQTQRPGTSGSQNGEEGGA
WPNNQFDTEMLQAMILASANEAADSNSTLGGGTGTMGLSARYGPQFTLQHVPDYRQNVYI
PGSTATLTNAAGKRDAKSAGSSGGNKKKSGKKEKK
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcgttgctgtaaggagccgcggggtgacgacggggcaggtactgagcctcttg
cttttgctcggcgtttccgactgggtttccgccgcgattcgctatgcgattcccgaggag
gcgcggagaggctccgcggtggggaacgtggtagccgacctggcgctggacctcgggcgg
ctgccggcacgccggctgcgggtggtgtccggcggcaacaagaagtacttcggggtggat
ctgacgagcggcgcgctgctggtgagcgagcggatagaccgggaggagctctgcggtgcg
ctctctccctgctccctcagctttgagatcgtggtggaaaatccgctggagctgtacagc
ggcgccgtggagatccaggacatcaatgacaacgacccggtttttcccagcagccaggcg
aggctggaaatcagcgagtcggtggcggccggagcacgcttcccgctagagagcgcgcaa
gaccccgatgtggggattaactctttgcagacctaccagctcagtgccaacccgcacttt
gcactcgacgtgcagacgagggtggatggaagcaagtacgcggagctggtgctagagaag
gaactggacagggaggagcaacgggagctccacttggtcttgactgcgctggatggaggc
agcccgccacggtcggcccacgtgcagatccacattgatgttgtggatgccaacgataac
tccccggtcttcaaccagtccacctacaaggcaagcgtgacggaaaacacacccagtggt
accctggtcaccaggatcagtgcgtacgatctggatgatgggccaaacggagacatcgtc
tattccttcagcagccacacacctgccaaggtacgagaactctttgctctggactcagcc
acaggggagttgagggtcaaggggcagctggactacgaggaaacgaagctgtacgagatt
tacttacaggctaaagacaagggcgttgttcctggtgtggctcattgcaaagtgctggtg
gaagttgtggatgtgaatgacaatgctccagaggtgacagtgacttctgtgtacagcccc
gtgcctgaagatgcagcctcagggacagttgtagctctgctgagtgtaacggacttggac
tcccatgataacggtctggtgaactgcttcatttcccctgggatcccattcacgctcagc
tcctccctcaaaaattactacacattgaaaacaaaagcagctctagaccgggaaaaagca
tcggaatataacattactatcacagccagggactcgggttcaccacccttgtctgcggta
aaacagatcctggtgcaggtgtcagatgtcaatgacaatgcgcccaagtcttcccaggac
tcctatgatgtgtatgtgctggagaacaacatgcctggcatccccattcttaatgtgagc
gccacagacccagaccttgggcgcaacgcccatctttcctatactatcttgcagggtgat
cccactgtaggccatctcttctccatcaaccgggagaatggcaccctctacctgctcacc
tccctggaccacgaggaccaggtggagttcagcatgatggtgcaggttcaggatggcggc
tctctgcctctggccactaatgtctcagtcagtgtgtttgtcactgacctcaatgacaat
gccccaaccgtgctgtaccctcaccccaacaccactgccacctatactgatgtggtggca
ccaggcactcctgctgggcacatggtcaccaaggtggtggcggtggacgcggatgcaggg
tacaatgcctggatctcctataccctgttgcaggccactgaccccagcctcttctcagtt
gggctgcacagcggggagatcttcacagcccgccagctccaggaggatgatgctccccag
cacacgctagtcnacctgctgaaagaccatggggagcctgtgctgtccactagtgccact
gtctccatctctgtggccgagatggtcaaggaggtgctcactgacctcactgatgtggca
cctgccaacgatcccaggaggcatgtgaccttctatctcaccctggctgtgattttggtg
tcagcagctttcttcatcaccatgttgtcactgggcatcttcaagtgctacaagtggagg
cagtcaaaggagctgttcaacagctcccggagcaccctgtacaggacaccagggcccttt
caccacattgacgccgtgcggggtggcttcacaccacccaacttctaccaccaggtctat
ctcaccacggactctcgccagagtgatatcctgtgtaaaaagcccttcacttccagcccc
ttggggagccgccagagcaccatgaggaatggtgagccagggctgtaccaccagatcgtg
ggcaccgccagccggctccccacccctgctgagcaagctcagcctaacacagactggcgc
ttctctcagacccagagacctggaacgagtggctcccagaatggagaggaaggtggagcc
tggccgaacaaccagtttgacacagagatgctccaagccatgatcctggcttcagcaaat
gaagctgctgacagcaactcaaccctgggcggcgggacgggcaccatggggctgagcgcc
cgctacggcccccagttcaccctgcagcacgtccccgattaccggcagaacgtctacatc
ccgggcagcaccgccaccctcaccaatgccgccggcaagcgtgatgccaagagcgctggc
tcctcgggaggcaacaagaagaaatccgggaagaaggagaagaagtag
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