Nipponia nippon (crested ibis): 104020294 Help Entry 104020294         CDS       T05756                                  Symbol THBS1 Name (RefSeq) thrombospondin-1   KO K16857   thrombospondin 1 Organism nni  Nipponia nippon (crested ibis) Pathway nni04115   p53 signaling pathway nni04145   Phagosome nni04148   Efferocytosis nni04350   TGF-beta signaling pathway nni04510   Focal adhesion nni04512   ECM-receptor interaction nni04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:nni00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     104020294 (THBS1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     104020294 (THBS1)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     104020294 (THBS1)    04148 Efferocytosis     104020294 (THBS1)   09143 Cell growth and death    04115 p53 signaling pathway     104020294 (THBS1)   09144 Cellular community - eukaryotes    04510 Focal adhesion     104020294 (THBS1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     104020294 (THBS1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:nni04131]     104020294 (THBS1)   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:nni00536]     104020294 (THBS1) Membrane trafficking [BR:nni04131]  Endocytosis   Phagocytosis    Opsonins     104020294 (THBS1) Glycosaminoglycan binding proteins [BR:nni00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    104020294 (THBS1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C EGF_3 cEGF TSP1_ADAMTS Laminin_G_3 TSP1_CCN Laminin_G_2 EGF Motif Other DBs NCBI-GeneID:  104020294 NCBI-ProteinID:  XP_009471958 LinkDB All DBs Position Unknown AA seq 1176 aa AA seqDB search MGPTAVLFLLLMLGVSEGKRTAESRSDDNSVFDLFELIGFIRKGAGRRAPGVHLVKGPES SSPAYRIEDASRIPAVPDSKFQDLLDAIHAEKGFILLATLRQAKKSRGTLLSVEQKDGSG HVFSLVSNGKAGTLDLSLSGDGKQQLVSVEDALLATGHWKNITLFVQEDRAQLYVGCEKM ENAELDIPIQNIFTRDLASSARLHIAKGGVNDNFQGLLQNVRFVFGTTLETILRNKGCSS STSAIITLDNPINGSSPAIRTNYIGHKTKDIQAVCGFSCDELTNMFVELQGLRSMVTTLQ DRVRKVTEENELIAKVVQITPGVCIHNGILHKNKEEWTIDSCTECTCQNSATICRKVSCP LMPCSNATVPDGECCPRCWPSDYADDGWSPWSEWTSCSVTCGNGIQQRGRSCDSLNNRCE GSSVQTRTCHLQECDKRFKQDGGWSHWSPWSSCSVTCGTGIITRIRLCNSPVPQLNGKPC EGEARENKSCQKDPCPINGNWGPWSPWDACTVTCGGGLQKRSRLCNNPEPQYGGKTCVGE ARGTQVCNKQDCPIDGCLSNPCFAGTTCTSSPDGSWKCGACPAGYHGDGVHCQDIDECKE VPDACFVFNGVHRCENTEPGYNCLPCPPRFTGTQPFGRSVEDAMANKQVCKPRNPCTDGT HDCNKNAKCNYLGHFSDPMYRCECKPGYAGNGIICGEDTDLDGWPNENLVCVANATYHCK KDNCPNLPNSGQEDYDKDGIGDACDNDDDDDGIPDDRDNCPFIYNPQQYDYDRDDVGDRC DNCPYNHNPDQTDTDNNGEGDACAVDIDGDGVLNERDNCQYVYNVDQRDTDLDGVGDQCD NCPLEHNPDQEDTDSDRIGDQCDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDAC DHDDDNDGIPDDKDNCRLVANPDQADSDGDGRGDACKDDFDQDSVPDVDDICPENVDISE TDFRRFQMIPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGFDEFNAVDFSGTFFI NTERDDDYAGFVFGYQSSSRFYVVMWKQITQSYWDSTPTKAQGYSGLSIKVVNSTTGPGE HLRNALWHTGNTPGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGYIRVVMYEGKKIMAD SGPIYDKTYAGGRLGLFVFSQEMVFFSDLKYECRDP NT seq 3531 nt NT seq  +upstreamnt  +downstreamnt atggggccaacggctgttctcttcctcctcctcatgctcggcgtctcggagggcaagcgc acggcagagtccaggagtgatgataacagtgtctttgatctctttgaactcatcggcttc attcggaagggagctgggcgccgggcacccggggtgcacctggtgaagggaccagaatcc tccagccctgcttaccgcattgaagatgccagtcgcatccctgctgtccccgactccaag ttccaagacttattagatgccatccatgctgagaagggcttcatcctcctggccactctc cggcaagccaagaagagtagaggcacgctgctgtccgtggaacagaaagatggctctggt catgtcttcagtctagtatcaaatggcaaggcaggcaccctggacctgagcctttctggt gatggcaagcagcaattagtgtcggtagaggatgccttgctagctacaggacactggaag aacatcaccctgtttgtgcaggaggaccgggctcagctctatgtggggtgtgagaaaatg gagaacgccgaactggacatacccatccagaacatcttcactagggacctggccagcagt gccaggctccacattgccaaagggggagtcaatgacaacttccagggactgctgcagaac gtgcggtttgtgtttggaacaactctggaaaccatcctgaggaacaaaggctgctccagc tccactagtgcgatcattactttggacaaccccatcaatggttccagcccagctatccgc actaattacattggccataaaacaaaggacatccaagcagtctgtggtttttcctgtgac gaactaacaaatatgtttgtggaactgcaagggctccggtccatggttacaacacttcaa gacagagttcgcaaagtgactgaagaaaatgaactcattgccaaagtggtccagatcact cctggagtgtgcattcataatggaatcttgcacaaaaataaggaagagtggactattgac agctgcaccgaatgtacctgccagaactctgccactatatgccggaaagtgtcctgtccc ctcatgccttgttccaatgccactgtgcctgatggggagtgctgcccccgatgctggcct agcgactatgcagatgatggatggtctccttggtctgaatggacttcttgttctgtgacc tgtgggaatgggattcagcagagagggcgatcctgtgacagtctcaataaccgctgtgaa gggtcttctgtacagactcggacttgccaccttcaggagtgcgataagagatttaaacag gatggtggctggagtcactggtcaccatggtcatcatgttctgtcacttgtggcacgggc atcatcactagaattcgtctctgcaactctccagtaccacagctgaacggcaaaccttgt gagggtgaggcaagagaaaacaaatcctgccagaaagatccttgcccaattaatggcaac tggggaccatggtctccatgggatgcttgcacagtgacatgtggaggaggacttcaaaag cgtagccgtctctgcaataatcctgagcctcagtatggtgggaagacttgcgtaggtgaa gctagagggactcaggtctgcaacaaacaggactgtccaattgatgggtgtctgtctaat ccctgctttgcgggaactacctgtaccagctcccctgatggttcctggaagtgtggtgcc tgtcccgctggctaccatggtgatggggtccactgccaagatattgatgagtgcaaagag gttcccgatgcctgctttgtcttcaacggagtgcacaggtgtgagaatactgaacctggg tacaactgtctgccttgtccaccacgtttcactgggacacagccatttggtcgcagtgtt gaggatgccatggctaacaaacaggtctgcaagccacgtaatccgtgcacagatggaaca catgactgcaacaagaatgccaaatgcaactaccttggccatttcagtgaccccatgtat cgctgtgaatgtaaaccaggctatgctggcaatggcataatctgtggagaagacactgac ttggatggatggccaaatgagaaccttgtttgtgttgccaatgccacttaccactgtaaa aaagacaactgccctaatctgcccaactctgggcaggaagactatgataaggatgggatt ggtgatgcctgtgacaatgatgacgacgatgatggtattcctgatgaccgggacaactgt ccattcatctacaacccacagcagtatgactatgacagggatgatgttggtgaccgctgt gataactgcccctacaatcacaaccctgatcaaactgacactgacaacaacggagaagga gatgcatgtgcagtggatattgatggagatggggtccttaatgaaagggacaactgccaa tatgtctacaatgtagaccagagggatacagacttggatggtgttggagatcagtgtgac aactgtccactggaacacaatcctgaccaggaagacactgattctgaccgcataggtgat cagtgcgacaataaccaggacatagatgaagatggccatcaaaataatcttgataactgc ccctatgtgcccaatgccaatcaagctgaccatgacaaggatggaaaaggtgatgcctgt gaccatgatgatgacaatgatggtatccctgatgacaaagataactgcagattggttgcc aacccagatcaagctgattctgatggcgatggacgtggagatgcttgcaaagatgacttt gaccaggacagcgtgccagatgttgatgatatctgccctgaaaatgtggacattagtgag actgacttccgaagatttcagatgattcccctggatcccaaaggaacatcccaaaatgat ccaaactgggttgttcgtcaccagggtaaagaactggttcaaacagtcaactgtgaccct ggccttgcagttggttttgatgaattcaatgctgtggacttcagtggcaccttcttcatc aatacagaaagggatgatgattatgctggctttgtatttggctaccaatctagcagtcgt ttctatgttgtcatgtggaagcagatcacccagtcttactgggactccacaccaaccaaa gctcaaggctactcgggtctctccatcaaagttgtgaattctaccactggtccaggagaa caccttcgtaatgctctgtggcacacaggaaacactcctggccaggtgagaactttgtgg catgaccctcgtcacataggctggaaagacttcactgcgtacagatggcgtcttagccac agaccaaagactggttacatcagggttgtaatgtatgaagggaagaaaatcatggcagac tcaggaccaatctatgataaaacctatgctggtggtcggctaggattatttgtcttctcc caagaaatggtgttcttctcagatcttaaatatgaatgcagagatccgtaa

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