Nestor notabilis (Kea): 104403498
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Entry
104403498 CDS
T08494
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin gamma-C5-like
KO
K16497
protocadherin gamma subfamily C
Organism
nnt
Nestor notabilis (Kea)
Brite
KEGG Orthology (KO) [BR:
nnt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nnt04515
]
104403498
Cell adhesion molecules [BR:
nnt04515
]
Cadherins
Protocadherins
104403498
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_tail
Cadherin_2
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
104403498
NCBI-ProteinID:
XP_010009954
LinkDB
All DBs
Position
Unknown
AA seq
959 aa
AA seq
DB search
PLLLAALSCLAASSSAQLRYTVPEDREPGSSVGDLAKDLGVEVRSLATRNLRLVSEGGQR
HFQVDLARGGGCXXXXRRLDREALCGQSPTCSLHLQLVMENPLQLHRIEVDVLDVNDNAP
QFPKPEVVLEITEVANPGTRLPLEVAEDPDMGSNSISTYELSPSEHFALSIKMRGDGVKM
PEIVLEKALDREKVPVHHLTLTALDGGNPVKSGTAKVTIHVLDANDNPPVCDPPISKVHL
EENVPVGTLVTKLNVTDLDEGPNGDVEYSFKTSNNAPGKFTKLFSLDPRTGEIRTKGPLD
YEESSAYEIAVRARDKGSPAMEGHCHLRVEIIDINDNSPEIVLTSLSSPVQEDATPGTVI
ALIGVKDSDSGDNGQVRLQIAKELPFKLVSSFKEHFSLVTNGPLDREKASGYNITVRAVD
SGFPQRATQKTFYLQIADVNDNAPNFSSPFDTAHVQENSLPGTSVFSVSASDPDEGSNSK
LSYSILDNGMQDIPISTYFRIDQDNGTVYTVRALDYEQDKVFQVPVEVKDGGSPALSSTA
VVHVFVLDENDNAPTIVYPSVPKGSAFHQTIPVLAEPGYLVTKIVAVDADSGHNAWLSYQ
LQESAEALPFQVERRSGEIRVAQALRESEDPHRLVVEVRDNGTPSLSASVVIVISPEENS
VQDFAKSLDLPKSSPKDTNLTLYLIISLVSISLVSCVMFAVAAARCLKAGTTSWTFAGCC
RGTGRKPASHFRGQMKPDGLIKYLDVGGAGLTSQAQNYTSCFSPMSDQSDFLFVKPFSHS
STAETVAAYERVTSTLASPCDGEHADIPHEIIQDQFALIFKGKNGGIKTLLFSLQQAQPN
TDWRFSQTQRPGTSGSQNGEEGGAWPNNQFDTEMLQAMILASANEAADGNSTLGGGTGTM
GLSARYGPQFTLQHVPDYRQNVYIPGSTATLTNAAGKRDAKSAGSSGGNKKKSGKKEKK
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
ccgctgctgctcgcagctctctcctgcctggcggcttccagcagcgctcagctccgctac
accgtgcccgaggaccgagagccgggctcctcggtgggcgacctggccaaggacctcggg
gtggaggtgcggagcctggccacccgcaacctgcgcttggtgagcgagggtgggcagcga
cacttccaggtggacttagcgcgggggggcggctgcnnnnnnnnnnnnaggaggctggac
cgggaagcactgtgtgggcagagccccacgtgctctctgcacctccaactcgtcatggag
aatcccctccagctccaccgtattgaggtggatgtcctcgacgtgaatgacaacgcgcct
cagttccctaagccagaggtggtcttggagatcactgaggtagccaaccctgggactcgg
ctacccttggaggtagcagaagacccggatatgggctccaactccatctccacctatgag
ctcagccccagtgagcattttgccctgagtatcaaaatgaggggagacggggttaagatg
cccgagatcgtacttgaaaaagcactggatagagagaaagtgcctgttcatcacttaaca
ctgacagccctggatggagggaatccggtgaaatctggcactgccaaggttaccatccat
gtcctggatgcaaatgacaaccctcccgtctgtgatccacctatatccaaggtacacctg
gaggagaatgtaccagtgggcactctggtcaccaagttgaatgtcaccgacctggatgaa
ggtcccaacggggatgtggaatattctttcaaaacaagcaataatgcacctggtaaattc
acgaagctgttttccttagatccccggacaggggagatcagaaccaaaggccccctggat
tacgaggaatccagtgcttatgagattgcagttcgagccagggacaagggatccccagcc
atggaaggacactgtcacctgcgagtggaaataattgatatcaacgataacagcccagag
attgtgctgacctctctctccagcccggtgcaggaggatgcaacccctggcactgtgatt
gccctcattggtgtgaaggacagtgattctggtgacaacgggcaggtccgtctccagata
gcaaaagaactcccatttaaactggtgtcatctttcaaagagcatttctcactagttaca
aatggtccccttgatcgggagaaggccagtggatacaacatcacagtgagggctgtggat
tcagggttcccacagagggctacacaaaaaaccttttacctccaaattgctgatgtgaat
gataatgcaccaaacttcagcagcccttttgatacagctcatgttcaggaaaactctctt
cctggaacttctgtcttttcagtgtcagcatctgatccggatgaaggtagcaactccaag
ctgtcttactccatcttggacaatgggatgcaggatatacccatctcgacctacttccga
atagaccaggacaacggcaccgtctatacagttcgagctctggactacgagcaggacaag
gtgttccaggtgcctgtggaggtgaaggatggtgggtctcctgcactgagtagcactgct
gtggtccatgtgtttgtcctggatgagaatgacaatgcccccaccattgtctacccgtcc
gtccctaagggttctgccttccaccaaaccatcccggtcttggcagaacctggctatctg
gtcaccaaaattgtagctgttgatgctgatagtggccataatgcctggctgtcctaccag
ctgcaggagagtgctgaggctttgcctttccaagtggaacgccgctctggagagataagg
gttgcacaggctctcagggaatcagaagatccccacaggctggtggtcgaagtgagggac
aatgggacaccatccctctcggcctctgtggtaatagtaatttctccagaggaaaacagt
gtgcaggactttgccaagtccttggacctccccaaatcttctcccaaggacaccaatcta
actctttacctcatcatctccttggtgtccatttcccttgtgtcctgtgtgatgtttgct
gtggcggctgcccggtgtctcaaagctggcactaccagctggacctttgcgggttgctgc
cgagggactggccgcaagcccgcctcccatttccgtgggcaaatgaagccagatggcttg
atcaagtacctggacgtgggaggagcgggcttgacctcccaggcacagaattacacctct
tgtttttcacccatgtcagaccagagtgatttcctctttgtaaaacctttcagccattct
agcactgcggagactgtggctgcctatgagcgggtgaccagcaccttagcgagtccctgc
gatggggaacatgctgatattccacacgaaataatccaggatcagttcgctctcattttc
aaaggcaagaatggaggtattaaaactcttctattttctttgcagcaagctcagcctaac
actgactggcgcttctctcagacccagagacctggaacaagtggctcccagaatggagag
gaaggtggagcctggccgaacaaccagtttgacacggagatgctccaagccatgatcctg
gcttcagcaaatgaagctgctgatggcaactcgacattgggcggtgggacgggcaccatg
gggctgagcgcccgctatggcccccagttcaccctccagcatgtccctgattaccggcag
aacgtctacatcccgggcagcactgccaccctcaccaacgccgccggcaagcgcgatgcc
aagagtgccggctcctcgggaggcaacaagaagaagtccgggaagaaggagaagaagtag
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