Nestor notabilis (Kea): 104404035
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Entry
104404035 CDS
T08494
Symbol
TARDBP
Name
(RefSeq) LOW QUALITY PROTEIN: TAR DNA-binding protein 43
KO
K23600
TAR DNA-binding protein 43
Organism
nnt
Nestor notabilis (Kea)
Pathway
nnt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nnt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104404035 (TARDBP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nnt03019
]
104404035 (TARDBP)
Messenger RNA biogenesis [BR:
nnt03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
104404035 (TARDBP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TDP-43_C
TDP-43_N
RRM_1
RRM_7
RRM_PARP14_3
RRM_3
Motif
Other DBs
NCBI-GeneID:
104404035
NCBI-ProteinID:
XP_010010674
LinkDB
All DBs
Position
Unknown
AA seq
411 aa
AA seq
DB search
MSEYIRVTEDENDEPIEIPSEDDGTVLLSTVTAQFPGACGLRYRNPVSQCMRGVRLVEGV
LHAPEAGWGNLVYVVNYPKDNKRKMDETDASSAVKVKRAVQKTSDLIVLGLPWKTTEQDL
KEYFSTFGEVLMVQVKKDIKTGHSKGFGFVRFTDYETQVKVMSQRHMIDGRWCDCKLPNS
KQSPDEPLRSRKVFVGRCTEDMTADELQQFFAQYGEVVDVFIPKPFRAFAFVTFADDQVA
QSLCGEDLIIKGISVHISNAEPKHNSNRQLERGGRFGGNPGGFGNQGGFGNSRGGGGGLG
NNQGSNMGGGMNFGAFSINPAMMAAAQAALQSSWGMMGMLASQQNQSGPSGNNQPQGNMQ
REQNQGFSSGNNSYGGSNSGAAIXASNAGSSSGFNGGFGSSMDSKSSGWGM
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagtatatccgggtgacggaggacgagaacgatgagcccatcgagatcccctcg
gaggacgacggcaccgtgctgctgtccacagtgaccgcccagttccccggggcgtgcggg
ctgcgctacaggaacccggtgtcgcagtgcatgaggggggtccggctggtggagggcgtc
ctgcacgcgcccgaggccggctggggaaacctggtctatgttgtgaattatcccaaagat
aataaaagaaaaatggatgaaacagatgcatcatcagccgtgaaagtgaaacgagcagtg
cagaagacttcagatttaatagttttgggtcttccctggaaaaccaccgaacaagaccta
aaggaatatttcagtacatttggagaagttctgatggtgcaggttaagaaggacattaaa
actggccactcaaaagggtttggttttgttcggtttacggattatgaaacccaggtgaaa
gtcatgtctcagcggcacatgatagatgggagatggtgtgactgtaaacttcccaattcc
aagcaaagtcctgatgaacctttgcgcagcaggaaagtgtttgttgggcgctgcactgag
gacatgacggcagatgaactccaacagttctttgcccagtatggagaagtggtagatgtc
ttcattcctaaacccttccgagcttttgcttttgttacatttgcagatgatcaggttgcc
caatctctttgtggagaggacttgatcattaaaggaatcagcgtacatatatccaatgct
gaacctaagcacaatagcaatagacagttagagagaggtggaagatttggtggtaatccg
ggaggctttgggaatcagggggggtttggcaacagcagaggaggtgggggaggactgggt
aacaaccagggcagtaacatgggtgggggcatgaactttggagcctttagcatcaaccct
gccatgatggcagcagcgcaggcagccctgcagagcagctggggcatgatgggcatgctg
gctagtcagcagaaccagtcggggccctcggggaacaaccagcctcagggcaacatgcag
agggagcagaaccagggctttagttcaggaaacaactcgtacggtggctccaactcgggg
gcagccattnnagcctccaacgcgggctccagcagtgggtttaacggaggctttggttca
agcatggattccaagtcgtcaggctgggggatgtag
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