Nestor notabilis (Kea): 104410488
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Entry
104410488 CDS
T08494
Symbol
SCN4A
Name
(RefSeq) sodium channel protein type 4 subunit alpha
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
nnt
Nestor notabilis (Kea)
Brite
KEGG Orthology (KO) [BR:
nnt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nnt04040
]
104410488 (SCN4A)
Ion channels [BR:
nnt04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
104410488 (SCN4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
IQ
GPHH
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
104410488
NCBI-ProteinID:
XP_010018959
LinkDB
All DBs
Position
Unknown
AA seq
1840 aa
AA seq
DB search
MAGLPHIPGIENLRPFTPASLAAIEQRIAEAEALRIKRQHVELPEEEELKPRSDLEAGKN
LPLIYGDPPLELIGTPLEDLDPFYKDKKTFIVLNKGKSIYRFSATPALYLLGPFHPIRRG
AIKVLIHSLFSMFIMITILTNCVFMTLSNPPAWSKNVEYTFTGIYTFESLIKVLSRGFCI
NDFTFLRDPWNWLDFMVISMAYITEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGAL
IQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCVRWPPLNDTLLEDLGLDNSTMAN
ATLYGNFTDDMASNFTSNFTSNSTFDFEAYISDEANFYFLEGALDALLCGNSSDAGKCPE
GYQCMKAGRNPNYGYTSYDTFSWAFLALFRLMTQDFWENLFQLTLRAAGKTYMIFFVVVI
FLGSFYLINLILAVVAMAYAEQNDATLLEEQQKEEEFQQLMEQLKKQQEEQEKMLRSRRS
SSSSLPSSVAEKEQDSDLNSDQDKAKDCNGQVIPKVVLQRSATVVDFNPNDDPEKPDHNH
LAVDNLDGPGLEKRVGSAISVLSNAVEELEEAHQKCPPWWYKCAHTFLVWNCCLPWRKLK
EFVKLVVMDPFVDLGITICIVLNTVFMAMEHYPMTEEFENVLSVGNLVFTGIFMAEMVLK
LIALDPYEYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNM
LIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYIECVCKISVDCTLPRWHMNDFF
HSFLIVFRILCGEWIETMWDCMEVAGQTMCLIVFMMVMVIGNLVVLNLFLALLLSSFSAD
SLAASDDDGEMNNLQIAIGRITRGIDFVKTSVIMLLRRLWKGKKVAPEEEQEPNKTDNSV
LNHVDTGQEPKSEYLDGVTGKEHFFMDELDHMNFINNPNLTVQVPIASEESDLYEETSTQ
SDTEDAKNPLSSDNASSFCSTVDYKPPEPEQEEVAEEAEESNEPEECFTEACVKRFPCLY
VDITSDRGRIWWNLRKACFRIVEHDWFETFIVFMILLSSGALAFEDIYIEQRKVIRTILE
YADKVFSYIFVIEMLLKWVAYGFKVYFTNAWCWLDFLIVDVSIISLTANWLGYSELGAIK
SLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY
YRCVNTTTGDLFDISVVNNKSDCMALLHTNEVRWVNVKVNFDNVGLGYLSLLQVATFKGW
MDIMYAAVDSRKTEEQPVYEINLYMYIYFVIFIIFGAFFTLNLFIGVIIDNFNQQKKKFG
GKDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPANKFQGMAYTLVTKQVFDIVIMILICLN
MVTMMVETDDQSELKTSVLYKINLVFIVIFTGECVLKMFALRHYFFTIGWNIFDFVVVIL
SILGIVLSDIIEKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIG
LLLFLVMFIYSIFGMSNFAYVKKEAGIDDIFNFETFGNSIICLFQITTSAGWDGLLSPIL
NSGPPDCDPDLENPGSSVKGDCGNPSIGIFFFCSYIIISFLIVVNMYIAIILENFSVATE
ESSEPLCEDDFEMFYEIWEKFDPDATQFIAYSALSDFVDTLQEPLRIPKPNKIKLVTMDL
PMVAGDKIHCLDILFALTKEVLGDSGEMDALKATMEEKFMAANPSKVSYEPITTTLKRKH
EEVCATKIQRAFRRYLLRRSVKQASYMYRHSKDEDALTEDAPEKEGLIATKMHEMYGNSG
TDVETAPAFGLEPVPTSEAQDAPKEAKAWDKERVVKESLV
NT seq
5523 nt
NT seq
+upstream
nt +downstream
nt
atggccggcctgccgcacatcccgggcatcgagaacctgcgccccttcacgcccgcctcg
ctggctgccatcgagcagcgcatcgccgaggccgaggcgctccggataaagaggcagcat
gtggagctgcccgaggaagaagagctcaaacccaggagtgacctggaagccgggaagaac
ttgcccctcatctatggtgacccacccttggagctcatcgggaccccgctggaggacctg
gacccattctacaaggataagaagacgttcatagtcctcaataaagggaagtccatctac
cgcttctcagcaactcctgccctctacctgctggggcccttccaccccatccgcagagga
gccatcaaagtgcttatccattcgttattcagcatgttcatcatgatcacgattttaacc
aactgtgtgtttatgacgttgagcaaccccccggcgtggtccaagaacgtggaatacacc
ttcaccgggatatacacctttgagtccctcatcaaggtactgtcaagaggcttctgcatc
aatgacttcacattcctgcgtgacccgtggaattggctggacttcatggtcatctccatg
gcctacattaccgaattcgtggacctggggaatatctctgctctcagaaccttccgtgtc
cttcgtgccttgaaaaccatcaccgtgataccagggctgaagacgatcgttggggctctg
atccagtcggtgaagaagctctcggacgttatgatcctcactgtcttctgcctgagcgtg
tttgccctcatcggcctccagctcttcatgggcaacctccggcagaagtgtgtgcggtgg
ccacccctcaatgacaccctgctggaggacttggggctggacaacagcacgatggccaac
gcaacgctctacggcaacttcaccgatgacatggccagcaacttcaccagcaacttcacc
agcaacagcacctttgatttcgaggcctatatcagtgatgaagccaatttctacttcctg
gagggagcgcttgatgccctgctctgtgggaacagcagcgatgctgggaagtgccctgaa
gggtaccagtgcatgaaggcggggaggaacccgaactatggctacaccagctacgacacc
ttcagctgggctttcctggccctcttccgcctcatgacgcaggacttctgggagaacctc
ttccagctgacgctgcgtgcagcagggaaaacgtacatgatcttctttgtggtggttata
ttccttggttccttctacctcatcaacctcatccttgcggtggtggccatggcttacgcg
gagcagaatgacgccacgctgctggaggagcagcagaaggaggaggaattccagcagctc
atggagcagctgaagaagcaacaagaggagcaagagaagatgttgcggagccggcggtcc
agcagcagttccctgcccagcagcgtggccgagaaggagcaagactcagacctcaacagc
gaccaggacaaggcaaaggactgcaacgggcaagtgatccccaaggtcgtgctgcagcgc
tctgctacggtggttgatttcaacccaaatgatgacccggagaaacctgaccacaaccac
ctcgctgtcgacaacctagatgggccaggccttgagaagagggtggggagcgccatcagt
gtcctctccaacgctgtggaagagctggaggaagctcaccagaagtgcccgccctggtgg
tataaatgtgcccacacgttcctggtgtggaactgctgtcttccttggcgcaagttgaag
gagtttgtcaagctggtggtgatggaccccttcgtggacctgggcatcaccatctgcatt
gtgctcaacacagtcttcatggccatggagcattaccccatgacagaggagtttgagaac
gtgctgagtgttgggaacctggtcttcacagggatcttcatggcagagatggttctgaag
ctcattgctctggacccctatgagtatttccagcagggctggaacatcttcgacagcatc
atcgtcaccctgagcctggtggagctgggcctggccaacgtgcaagggctgtccgtgctc
cgctccttccgcttgctgagggttttcaagctcgccaagtcctggcccacccttaacatg
ctcatcaagatcattggcaactcggtgggtgccctggggaacctcacgctggtgctggcc
atcattgtcttcatctttgccgtggtggggatgcagctttttgggaagagctacatagag
tgtgtgtgcaagatctctgtggactgcacgctgccccgctggcacatgaatgacttcttc
cactccttcctcatcgtcttccgcatcctctgcggggagtggatcgagaccatgtgggac
tgcatggaggtggctggccagaccatgtgcctcattgtcttcatgatggtcatggtcatc
gggaacctcgtggttctgaacctgttcttggctctgctgctgagctccttcagcgctgac
agcctggcagcatccgatgacgatggggagatgaacaacctgcaaattgctattggcagg
atcaccagggggatcgactttgtaaagacctctgtcatcatgctgctacgcaggctgtgg
aaggggaagaaggtggccccagaggaagagcaagaacccaataagacggacaactctgtg
ttaaaccatgtggacactggccaggagcccaagtcggagtatctggatggagtcactggc
aaagagcactttttcatggatgaactggaccacatgaatttcattaacaaccccaacctg
acagtgcaggtccccattgcctctgaggagtctgacctctacgaggagaccagcacccag
tccgacaccgaggatgccaagaatcctctctccagtgacaacgcgtcgtccttctgcagc
acggtggattacaagcccccagagccagagcaggaggaggtggcagaagaggctgaggag
agcaatgagcccgaggagtgcttcaccgaagcctgcgtgaagaggtttccctgcctctat
gtggacatcaccagcgacagaggtaggatatggtggaacctccggaaagcctgcttccgc
attgtggagcacgactggttcgagaccttcatcgtcttcatgatcctcctcagcagcggg
gcactggcttttgaggacatctacatcgaacaacgaaaggtgatacgcaccatcctggag
tacgctgacaaggtcttctcctacatctttgtcattgagatgctgctcaagtgggtggcc
tatggcttcaaggtgtacttcaccaacgcgtggtgctggctggacttcctcattgtcgat
gtttccattatcagcctgacagcgaactggctgggatactctgagctgggagccatcaag
tcactgcggacactgagggctctgagaccactgcgtgccctgtccagatttgaaggcatg
agggtggtggtgaacgccttgctgggtgccatcccctccatcatgaacgtcctgctggtc
tgcctcatcttctggctgatattcagcattatgggggtgaacctctttgcggggaagtac
taccgctgcgtcaacaccaccacgggggacctcttcgacatcagcgtcgtgaacaacaag
agcgactgcatggccctcctccacaccaacgaagtcagatgggtcaatgtcaaggtcaac
tttgacaacgtgggcttgggatacctctccttgctgcaggtggcaaccttcaagggctgg
atggacatcatgtatgctgccgtggactcacgcaagactgaagagcagccagtgtacgag
atcaacctctacatgtacatctattttgtcatcttcatcatcttcggtgccttctttacc
ctgaacctcttcatcggcgtcatcatcgacaacttcaaccagcagaagaaaaagtttgga
ggcaaagacatcttcatgacagaagagcagaagaaatactataatgctatgaagaagctc
ggctccaagaaaccccagaagcccatccccaggccagcgaacaagtttcaagggatggca
tatacccttgttaccaagcaagtgtttgacatagtcatcatgatcctgatttgtcttaac
atggtgaccatgatggttgaaacagatgatcaaagtgaactcaaaacatctgttctctac
aagataaacctggtcttcatcgtcatcttcaccggagagtgtgtgctcaagatgtttgcc
ttgcgtcactacttcttcactattggctggaacatctttgactttgtggttgtcatcctc
tccatcttaggtatcgtcctctcagacatcatagagaagtatttcgtgtcacccactctc
ttcagggtcatcaggctggcaaggattggccgcgtcctccggctgatccgaggggcgaaa
ggcatccggactctcctctttgctctgatgatgtccctgcctgccctgttcaacatcggc
ctcctgcttttccttgtcatgttcatctactccatctttgggatgtccaactttgcctat
gtaaagaaggaagcagggatcgatgacatcttcaactttgaaacttttgggaacagcatc
atttgcctcttccagatcaccacgtcagcaggatgggatggcctcctcagcccaatcctc
aacagtggtccccctgactgcgaccctgacctggaaaaccctggcagttcagtgaaaggg
gactgtggcaatccatccattggcatcttcttcttctgcagctacatcatcatctccttt
cttatcgtggtgaacatgtacatcgccatcatcctggagaacttcagtgtggccacagag
gagagcagtgaacccctctgcgaagatgattttgaaatgttttatgaaatctgggagaag
tttgaccctgatgccacccagttcattgcatacagcgccttgtctgactttgtagacacc
ttacaggagccactcagaattcccaagccgaacaagatcaagctagtcaccatggaccta
cctatggttgctggggacaaaatccactgtctggatatcctctttgccctaactaaggaa
gtgctgggagactcaggagagatggatgccttgaaggccaccatggaggagaagttcatg
gccgcaaacccgtcaaaggtttcctatgagcccatcaccaccactctgaaaaggaagcac
gaggaagtctgtgctacgaaaatccagagagctttccggaggtacctcctgaggcgctcg
gtgaagcaggcgtcctacatgtacaggcacagtaaggacgaggatgccttgacagaggat
gcacctgagaaggaaggtctgatcgctaccaaaatgcacgagatgtatgggaacagtggg
acagacgtggagacagctcctgcctttggtctggagcccgttcccacctcagaagcgcaa
gatgctcccaaagaagcaaaagcttgggataaggaacgcgttgtgaaagagtcgctggtg
taa
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