Nelumbo nucifera (sacred lotus): 104588307
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Entry
104588307 CDS
T04131
Name
(RefSeq) DNA repair protein RAD16
KO
K15083
DNA repair protein RAD16
Organism
nnu
Nelumbo nucifera (sacred lotus)
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nnu03400
]
104588307
DNA repair and recombination proteins [BR:
nnu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
104588307
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
zf-C3HC4_2
ResIII
zf-C3HC4_3
zf-C3HC4
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
Prok-RING_4
zf-RING_6
zf-Nse
Motif
Other DBs
NCBI-GeneID:
104588307
NCBI-ProteinID:
XP_010244485
UniProt:
A0A1U7ZB71
A0A822XMK8
LinkDB
All DBs
Position
Un
AA seq
952 aa
AA seq
DB search
MKLRSQRQRRVSGRAVKTNRSRTRHNSDEEDYVPPSDSDSSGSDKGGVSFLKEDELKHDE
EGGGTKELDGNDKGKVMIEISEGDSVTDDAADSDYIEHLKESKKTVSEKKGKRPVHRGKK
PKSNMEQDGEESNNVEPEVTIYDLEEVSGYWMDEQKKKNNTQKKKKRKRRPTLLWEALEE
ENERWLDANETEDVNFDRLDDEVAETAEEPQDLLMPLLRYQREWLAWAMKQEDSELRGGI
LADEMGMGKTIQAIALVLAKHASHRSSTGSTGPLSSPGPSTALPKVKCTLVICPVVAVMQ
WADEIDRFTPKGSTKVLVYHGVNKKKIMNEFSEFDFVLTTYSTVEADYRKNVMPPKEKCI
WCGKLFCPKKMVVHLQYFCGPNAVKTAKQSKQVRKEGKHKLNYSEVKMKPPVQEDEVIEF
EGSKVNGAGKKTKKQQKQEKRTMPGDISSNGRPTNLDQGTPAGKSALHSVKWERIILDEA
HYIKDRRSNTAKGVLALESSYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYFCRDCDCK
SLDYSSTTQCPNCVHKSVRHFCWWNRFIAKPIQCPKNVGDGRRAMVLLKNKLLKTIVLRR
TKKGRSADLALPPRIVSLRRDRLDIKEEEYYKSLYNESQLQFNTYVEAGTLMNNYAHIFD
LLTRLRQAVDHPYLVVYSKTAALRNGSATDASIGEQDCGICHDAAEEPVVTACAHVFCKA
CLVDYSTTLEQGSCPSCSKPLTVDFTAKMNAEYQGTKTTIKGYRHSSILSRICLEDFQTS
TKIDALREEIRFMIERDGSAKGIVFSQFTSFLDLISYALHKSGLNCVQLVGSMSMTARNS
SIKRFTDDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKP
IRIIRFIIEDTIEERILKLQEKKELVFEGTIGGSSEALGKLTAEDLRFLFTT
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttcgttctcaacgtcaacgcagagtttcaggacgggccgtcaaaaccaatagg
tcccggactagacataactctgacgaagaagattacgtcccaccttcagattctgatagc
agtggcagcgacaaaggtggtgtttcttttctgaaagaagatgagctaaaacacgatgaa
gaggggggagggacgaaagagttggacggtaatgataaagggaaggttatgattgaaata
agcgaaggggactccgtgactgatgatgccgctgattctgattacattgagcatctaaag
gaaagtaagaagacggtatcggagaagaaagggaagagaccagttcacaggggaaagaaa
ccgaaaagcaatatggaacaagacggtgaagaaagcaacaatgtagaaccggaggttaca
atttatgatcttgaagaagttagtggttattggatggatgaacagaagaagaagaacaat
actcagaagaagaaaaaaagaaaaagaagaccaacattattgtgggaagctttggaggag
gagaatgagagatggcttgatgcaaatgagacagaagatgttaattttgatcgcctagac
gatgaagtggcagaaactgctgaggagccccaagacttgcttatgcctttactgaggtac
caaagggagtggttggcctgggcaatgaagcaggaggattctgaacttcgaggaggaatc
cttgcggatgaaatggggatggggaagacaatccaagccattgcacttgttcttgccaag
catgcatcccatcgaagtagtaccggctccactgggcctttgtcctcacctggtccatcc
actgcgttgcccaaagttaaatgcacccttgttatttgtcctgttgttgcagtgatgcag
tgggcggatgaaattgatcgatttacacctaaaggtagcaccaaagtgctggtatatcat
ggggttaacaagaagaagattatgaatgagttctctgaatttgattttgtcctgactaca
tattctactgttgaggcagattataggaagaatgtgatgccacccaaggagaagtgtatc
tggtgtggcaagttattttgtcccaagaagatggttgtccatctacagtatttttgtggt
cctaatgccgttaaaacagctaagcagtccaagcaagtaagaaaggaggggaagcacaaa
ttaaactattctgaggtgaaaatgaaacctcctgttcaagaggatgaggtgattgaattt
gagggcagcaaagtgaatggggctggtaagaagaccaagaagcaacagaaacaagaaaaa
agaacaatgcctggggatatttcttcaaatgggaggccaaccaatttagaccagggaaca
cctgcagggaaatcagctttgcattctgtaaagtgggaacgtattattttggatgaggca
cattatataaaagatagacgaagcaatacagcaaagggggttcttgctttagaatcttct
tataaatgggctttaagtggcactccccttcagaatcgtgttggtgaactttattccctg
gtccgtttcctgcaaatagttccctactcatattacttttgtagggattgtgattgcaaa
tcacttgattacagctctacaacacaatgccccaactgtgttcataaatctgtgaggcat
ttttgctggtggaacagatttatagctaaaccaatacaatgtccaaagaatgtcggcgat
ggaagacgggctatggttctgctcaaaaataaacttttgaaaactatagtgcttagacgc
actaagaaaggcaggtctgcagatcttgcccttcctcctagaattgtttctttgaggcga
gataggctggatattaaagaagaagaatattataaatcgctgtataatgaaagtcaacta
caatttaatacatatgttgaagctggaaccctgatgaataactatgctcacatatttgac
ttgcttactcgattacggcaggcagttgatcatccataccttgtggtctattctaaaaca
gcagcattaaggaatggaagtgcaacagatgcttctattggtgaacaagattgtggcatt
tgccatgatgcagcagaggagccagtggttactgcttgtgcacatgttttctgtaaggct
tgtttggtggattactctacaaccttggaacaaggttcatgcccatcgtgctcaaaacca
cttactgttgacttcacagcaaagatgaatgcagagtaccagggtactaaaacaaccatc
aagggttatagacattcaagtattctgagtagaatttgtcttgaagatttccagacgagc
acaaaaattgatgccttgagggaagaaatcagattcatgattgagagagatggttctgca
aaggggattgtttttagccagttcacatcattcttggatttgataagctatgccctccat
aagtctggcttaaattgtgttcaattagtgggaagtatgagcatgactgccagaaattct
tccataaagagatttactgatgatccagactgcaagattttccttatgagcttgaaagct
ggtggtgttgctctcaatctaaccgttgcatcacatgttttcctgatggatccttggtgg
aatccagccgtggagaggcaagcccaagatcgaatccatcggatcggacaatacaaacca
atcaggatcataaggttcataattgaggacaccattgaagagaggattcttaagttgcaa
gagaagaaggaattggtgtttgaagggactataggtggttcttctgaggctctgggaaaa
ctaacagcagaggacttaaggttcttgttcaccacctaa
DBGET
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