Nelumbo nucifera (sacred lotus): 104588504
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Entry
104588504 CDS
T04131
Name
(RefSeq) 110 kDa U5 small nuclear ribonucleoprotein component CLO
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104588504
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nnu03041
]
104588504
Spliceosome [BR:
nnu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
104588504
Complex C
U5 SnRNP specific factors
104588504
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
MMR_HSR1
EFL1
Roc
EF-G_D2
Ras
Septin
SOI
Motif
Other DBs
NCBI-GeneID:
104588504
NCBI-ProteinID:
XP_010244756
UniProt:
A0A1U7ZBV6
LinkDB
All DBs
Position
Un
AA seq
989 aa
AA seq
DB search
MDDSLYDEFGNYIGPDIVSDQESEGEDEDEDLPDKPGEERDASDEDDATAAGISGWITAS
NDVDMDNQIVLAEDKKYYPTAEEVYGEDVETLVMDEDEQPLEQSIIKPVRNIKFELGVKD
SSTYVSTQFLLGLMSNPALVRNVALVGHLQHGKTLFMDMLIEQTHHISTFDPNSEKHMRY
TDTRIDEQERKISIKAVPMSLVLEDSNSKSYLCNIMDTPGHVNFSDEMTAALRLADGAVL
IVDAAEGVMVNTERAIRHAIQERLPIVVVINKVDRLITELKLPPKDAYHKLRHTIEVINN
HISAASSTAGGVQTVDPAAGNVCFASSSAGWSFTLQSFAKLYVKLHGIPFDANKFATRLW
GDMYYHPDERVFKRKPPVNGGERSFVQFILEPLYKIYSQVIGEHRKSVEATLSELGVTLS
NAAYRLNVRPLLWLACSSVFGSATGFTDMLVNHIPSAKGAAARKVEHIYTGPRDSSIYQA
MEDCDPSGPLMINVTKLYPKSDCSVFDAFGRVYSGEIQTGQTIRVLGEGYSPDDEEDMTI
KEVTKLWVYQSRYRIPISKAPPGSWVLIEGVDASIMKTATLCNVDYDEDVYIFRPLRFNT
LPVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDL
RELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLEKGLAEDIENGV
VSIDWPRKRLGDFFQTKYDWDLLAARSIWAFGPDKQGPNILLDDTLPSEVDKNLLNAVKD
SIVQGFQWGAREGPLCDEPIRNVKFKIVDARVAPEPLHRGTGQIIPTARRVAYSAFLMAT
PRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFGFE
TDLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMS
EDVSINKFFDEAMMQELAQQAADLHQQMI
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atggacgatagcttgtatgacgagtttggcaactacataggacccgacatcgtgtccgac
caagagagcgaaggggaggatgaagacgaagacctcccggacaaacccggggaagaaagg
gacgcctccgatgaggatgacgccaccgcagctggtatctccgggtggataactgcgtct
aatgatgtcgacatggataaccaaattgtacttgccgaggacaagaagtattaccctact
gccgaggaggtgtacggtgaggatgtcgagactctggttatggatgaagatgaacagcca
ttggaacagtctataattaagcctgttaggaatattaagtttgagttgggtgtgaaggat
tcgtcgacttatgtgtcgacgcagttccttttgggtctcatgtcgaatccggcgctggtt
aggaatgttgcactcgtggggcatttgcagcatgggaagactcttttcatggacatgttg
attgagcagactcatcacatttctacttttgatccgaacagtgagaagcacatgaggtac
acggacacaagaattgatgagcaagagaggaagatttccatcaaggcggtgcctatgtcg
cttgttcttgaagatagtaattctaaatcctatctatgtaatattatggatacccctggc
catgtcaatttctctgatgagatgactgccgcactcagacttgctgatggtgctgtgttg
attgttgatgctgctgagggagtaatggtaaacacagaaagggcaatacgtcatgcaatc
caagaacggcttcctatagttgttgtaatcaataaggttgaccggctgataacagaactt
aaattaccaccaaaggatgcataccataaattaaggcatacaatagaagtaatcaataac
cacatatctgctgcctcatcaactgcaggaggtgttcaaaccgttgatcctgctgctgga
aatgtttgttttgcaagttcaagtgctggttggtccttcactttgcaatcatttgccaag
ctttatgttaagctccatggaattccatttgatgctaataagtttgcaacccgtctttgg
ggtgatatgtactatcatcctgatgaaagggtcttcaagaggaaaccccctgtaaatgga
ggagaaagatcatttgtgcagtttatccttgagcctctctacaaaatctatagtcaggtg
ataggagaacacaggaagagtgtggaggcaactctttcagaacttggtgtaactcttagc
aatgcagcataccgattaaatgttaggcctttgctatggttggcttgtagttcagttttt
gggtctgccacaggcttcactgacatgctggttaaccacattccttcagccaagggtgct
gcagcgaggaaggtagagcacatatatacaggtcctcgagattcttcaatataccaggct
atggaagattgtgacccttcaggtccactgatgattaatgtgacaaaactttacccaaag
tcggattgtagtgtatttgatgcttttggtagagtttacagcggtgagattcagaccggc
cagaccatacgtgtactgggagaaggttattcacctgatgatgaggaggatatgaccata
aaagaagtgacaaagttgtgggtttatcaatctcgttatcgcatacccataagcaaagct
cctcctgggtcttgggtactaatagagggtgttgatgcttcgattatgaagactgctaca
ctttgcaatgtggattatgatgaagatgtgtatatttttcgacctcttcgtttcaatacc
ctccctgttgtcaagacagcaactgagcctttgaatccaagtgagttacccaagatggtg
gaaggtctccgaaagatcagtaagagctaccctctagcaattaccaaagttgaggagtca
ggtgaacatactattttaggtactggggagttatacttggattctataatgaaggacctt
agggagctctattctgaagtggaagtcaaggtggcagatcctgttgtttcattttgcgaa
acagtcgtggagtcgtcatcaatgaaatgttttgctgaaacacccaacaagaagaataaa
ataaccatgattgcagaacctttggagaaaggacttgcagaagatattgagaatggtgtt
gtaagcattgattggcctcgaaagagacttggtgatttcttccagacaaaatatgattgg
gatttgcttgcagcacggtctatctgggcatttgggcctgataaacagggacctaacatc
ctattagatgataccctccctagtgaagttgacaagaatttgctgaatgctgtaaaggat
tctattgttcaggggttccaatggggtgcccgagaaggacccctctgtgatgagccaatc
agaaatgtaaaattcaaaattgttgatgcaagggttgctccagagcctttgcatcgtggc
actggtcagatcattcctacagcccgacgggtggcctactcagcttttctcatggcaaca
ccacggcttatggaacctgtatactatgtagagatacaaactccaatagactgtgtctct
gcaatctacactgtgctgtctcgtcggcgtgggcatgttacagctgatgttcctcagcca
ggcaccccagcttatattgtgaaggcatttctaccagttatagaatcatttggcttcgag
acagacttgaggtaccatactcaagggcaagcgttctgcctttccgtatttgatcattgg
gccatagttcctggagacccccttgacaagagcatagtgttgcggcctcttgaacctgca
cctattcagcaccttgctcgtgagttcatggtgaagacaaggcgtcggaagggcatgagt
gaggacgtgagcatcaacaaattcttcgatgaagccatgatgcaagagcttgctcaacag
gcagctgaccttcatcagcaaatgatttaa
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