KEGG   Nelumbo nucifera (sacred lotus): 104600540
Entry
104600540         CDS       T04131                                 
Name
(RefSeq) RING-box protein 1a
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
nnu  Nelumbo nucifera (sacred lotus)
Pathway
nnu03420  Nucleotide excision repair
nnu04120  Ubiquitin mediated proteolysis
nnu04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:nnu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    104600540
   04120 Ubiquitin mediated proteolysis
    104600540
  09124 Replication and repair
   03420 Nucleotide excision repair
    104600540
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:nnu04121]
    104600540
   03400 DNA repair and recombination proteins [BR:nnu03400]
    104600540
Enzymes [BR:nnu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     104600540
Ubiquitin system [BR:nnu04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   104600540
  Multi subunit type E3
   SCF complex
    Ring finger protein
     104600540
   Cul2 complex
     104600540
   Cul3 complex
     104600540
   Cul4 complex
     104600540
   Cul7 complex
     104600540
   Cul8 complex
     104600540
   Cul9 complex
     104600540
DNA repair and recombination proteins [BR:nnu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      104600540
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      104600540
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 104600540
NCBI-ProteinID: XP_010261838
UniProt: A0A1U8AHB4
LinkDB
Position
Un
AA seq 120 aa
MASLDTDINMIPVGEGSSGAGPSSSSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNH
IMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq 363 nt   +upstreamnt  +downstreamnt
atggcatccctggacactgatatcaacatgattccggtcggcgagggctccagtggagct
ggtccatcgtcttcgtcgtcgacgaagaagccgaagcgtttcgagatcaagaagtggaat
gcagtcgctctttgggcatgggatatcgtcgtggataactgtgctatttgcaggaaccac
atcatggatctatgtatcgagtgccaagctaatcaagcgagcgcaacaagcgaggagtgc
acggtggcttggggtgtatgcaaccatgcgttccacttccattgcatcagccgatggctc
aaaacccgtcaagtttgcccactggataacagcgagtgggaatttcagaagtatggccac
tag

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