Nelumbo nucifera (sacred lotus): 104607075
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Entry
104607075 CDS
T04131
Name
(RefSeq) ABC transporter I family member 20
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104607075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nnu03019
]
104607075
Messenger RNA biogenesis [BR:
nnu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
104607075
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
AAA
Arf
AAA_15
AAA_23
ORC-CDC6-like
nSTAND3
VapE-like_dom
Zeta_toxin
AAA_30
Motif
Other DBs
NCBI-GeneID:
104607075
NCBI-ProteinID:
XP_010270871
UniProt:
A0A1U8ASD6
A0A822Z072
LinkDB
All DBs
Position
Un
AA seq
327 aa
AA seq
DB search
MAEDPKPTIEINNLKFTYPGIDGHPPPGSTPLIDDFSLSLYTGGRCLLVGSNGAGKTTIL
KILGGKHMVEPHMVRVLGKSAFHDTGLTSSGDLCYLGGEWRRDVAFAGFEVPIQMDISAE
KMIFGVSGIDPQRRAELIKVLDIDLSWRMHKASDGQRRRVQICMGLLKPFKVLLLDEITV
DLDVLARADLLRFLRKECNERGATIIYATHIFDGLEDWPSHIVYIAHGRLQLAMPIQKVK
EMSNLSLMRTVESWLRKERDEERRRRKERKASGLLKFEKKVEGTRVVGDPASSVVRAMNN
GWAAGRLHSTVAGEENFLFSSNRVLRQ
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggatcccaaacctacgatcgagatcaacaacctcaagttcacgtatcccggc
atcgatggtcaccctccgcccggttccacgcctttgatcgacgacttctctctgtctctc
tatactggaggccgctgccttctagttggctccaatggcgccgggaagacgacaattctg
aagatattaggagggaaacacatggtggagccccacatggttcgagtgctcggtaaatcg
gctttccatgataccggtttgacgtcgtccggtgatctctgctatcttggtggagagtgg
aggcgggatgtcgcttttgctgggtttgaagttccaatacaaatggacatttctgcagaa
aaaatgatatttggtgtttcaggtattgatccacagaggagagctgaactcataaaggtg
ttagatattgatctatcatggagaatgcacaaggcatccgatggtcagagaagacgtgtg
caaatttgtatgggccttctgaagccatttaaggttctccttcttgatgaaattactgtt
gaccttgatgtgctagcaagggctgaccttttgaggttccttagaaaggaatgtaatgaa
cggggtgctacaattatatatgcaacccatatatttgatggtcttgaggattggccttca
catatagtttatatagctcatgggaggttgcaattggcaatgccaatacagaaagttaag
gagatgagcaatttgtccctgatgagaaccgtggaaagttggcttaggaaggagagggat
gaagaaaggaggagaagaaaagagaggaaagcaagtggtcttttgaaattcgaaaagaaa
gttgagggcacccgagttgttggcgatccagccagtagtgttgttcgtgcaatgaacaat
ggttgggctgcaggaaggcttcactcaactgtggcaggtgaggaaaatttcttattcagc
tcaaaccgcgttttgaggcagtag
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integrated database retrieval system
