Nitrosococcus oceani: Noc_0148
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Entry
Noc_0148 CDS
T00281
Name
(GenBank) Radical SAM domain protein
KO
K10026
7-carboxy-7-deazaguanine synthase [EC:
4.3.99.3
]
Organism
noc
Nitrosococcus oceani
Pathway
noc00790
Folate biosynthesis
noc01100
Metabolic pathways
Module
noc_M00988
PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
Brite
KEGG Orthology (KO) [BR:
noc00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00790 Folate biosynthesis
Noc_0148
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
noc03016
]
Noc_0148
Enzymes [BR:
noc01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.3 7-carboxy-7-deazaguanine synthase
Noc_0148
Transfer RNA biogenesis [BR:
noc03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
Noc_0148
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
DUF6757
PyrI_C
Motif
Other DBs
NCBI-ProteinID:
ABA56681
UniProt:
Q3JER5
LinkDB
All DBs
Position
158586..159227
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AA seq
213 aa
AA seq
DB search
MKRLRITEIFYSLQGEARSVGWPTAFVRLTGCPLRCHYCDTEYAFQGGRWMALDGILDAV
AEFGVRHVTVTGGEPLAQSACLGLLTRLCDAGYEVSLETSGALDISAVDRRVIKVMDWKT
PGSGEEARNLSTNLEHLSSQDQVKLVLCNRHDYDWAKGVLERHRLTEYCEVLFSPSYEQL
SPTDLADWILADHLPVRMQIQLHKYLWGEEPGR
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtctgcgtattactgaaattttttattccctacagggagaagcccgcagcgtt
gggtggcccacggcgttcgtgcgtttaaccggttgccccctccgctgccattactgcgat
actgaatatgccttccaaggcgggcgctggatggcgctggacggaattcttgacgctgtt
gcagaatttggggtccgtcatgtcaccgtgaccggcggcgagcctctagctcaatcagct
tgcctaggacttttaacccggctctgcgatgctgggtatgaggtctctttagaaactagt
ggcgccttggatatctcggctgttgatcgccgggtgatcaaggttatggactggaaaacg
ccaggctcaggggaagaagcccgtaatctttctactaatcttgagcacctctcttcccag
gaccaggtaaagttggtgctttgtaaccgtcatgattatgattgggccaagggagtcctt
gagcgtcatcgtttgactgagtattgtgaagttttgttttcccccagctacgagcaattg
agtcccactgatctagctgactggatactagcagatcatttgcccgtgaggatgcagatt
cagctgcataaatacctttggggggaggagccgggacgatga
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