Nitrosococcus oceani: Noc_2978
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Entry
Noc_2978 CDS
T00281
Name
(GenBank) glutamate dehydrogenase (NAD)
KO
K15371
glutamate dehydrogenase [EC:
1.4.1.2
]
Organism
noc
Nitrosococcus oceani
Pathway
noc00220
Arginine biosynthesis
noc00250
Alanine, aspartate and glutamate metabolism
noc00430
Taurine and hypotaurine metabolism
noc00910
Nitrogen metabolism
noc01100
Metabolic pathways
noc01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
noc00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
Noc_2978
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
Noc_2978
00220 Arginine biosynthesis
Noc_2978
09106 Metabolism of other amino acids
00430 Taurine and hypotaurine metabolism
Noc_2978
Enzymes [BR:
noc01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.1 With NAD+ or NADP+ as acceptor
1.4.1.2 glutamate dehydrogenase
Noc_2978
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_GDH_CD
GDH_C
GDH_HM3
GDH_HM2
GDH_ACT3
GDH_HM1
ELFV_dehydrog
GDH_ACT1
Motif
Other DBs
NCBI-ProteinID:
ABA59420
UniProt:
Q3J6X6
LinkDB
All DBs
Position
3364313..3369097
Genome browser
AA seq
1594 aa
AA seq
DB search
MKIFVEVRESRATYSDHEKKINEIHSFLEQQSKIHGKRFLKALATILITPDSFLLSIPTY
HLASLITDFFDLIEARGKKIAAHCFPFPEKTGTLLLISSPYASYLVESLGASKEAQDIDF
HLMAYHALMIKRRDRKIIDLGTADKSGPKESLILLKLEDINEKKFQDFAATIQKIVSKTL
QVQSDKENIAAQVRQLEQAPSLQAWKSFLIWCQQGAFIPFSYHCFIVNSQSGKKIVIQEQ
NDKRLGLPFDSLLESTKEENVSSLLTILNPEEIQRELPVLVQKTRIKSPLYHSEYLTYMG
IREPLEKGQIKEHALIGLFSEKAFAGDTMNISALRDKAEQSLKQLRLLTVDHEYNKLIEL
LHFFPKVELFFMGEVQLQIIARSLLPFLYRSDTVKLLILASPSPTRISTLILIPQGFFDE
SHLRDMEIYLCQELAAILENSQLIRGIHSHYIGLHLTLIPQKEEVLIPLEQLENTLTRIA
KPWNYKLQVLLEQAMGKEQGEVLWNKYGKGFLPEYQVLTPPQAALQDIKGLERVLETGQQ
FIDLWESPYELSKEHYRLQFYSSQESLLDELMPVLKNLGLRVIDQVRFTLEVENRGFFIK
SFSIKAAKETAKPLSSLRVPLLDALGALFRGEVDDDPLNELLVLTGLSWKEIDIFRSYRN
YYFQLGTHFTLSRFHQSLSHNPQVALLLCRYFEARFRPDPQWDDPVRREEEGLLPIRLEL
ATALKSVTDVNEDRILRTLFNLIDATVRTNFYYRHKQRDYFLSFKISSLGVIDMPPPRPL
YEIYIHSATVEGIHLRGGRVARGGLRWSDRPDDFRTEILGLMRTQMMKNSLIVPVGAKGG
FIVKRSFSSREEGAKLAKQAYITFIQSLLDLTDNREGSQVVRPPKVVAYDEDDPYLVVAA
DKGTAHLPDTANEVAQEYHFWLDSAFASGGAFGYHHKKLGITARGAWECVKRHFRELDLD
IQTQPFTAIGIGSMDGDVFGNGMLLSRQIRLLAAFGPGHIFIDPEPDPEVSYRERKRLFK
LPGSSWNDYDDTLISEGGGIFPRRAKDIPLSPQVRYLLKTRHLSMDGEGLIRLLLTTPVD
LLWFGGIGTYVKASTEKHIEVGDRTNDTVRVDASQLQARVVGEGANLGFTQRGRIEYALG
GGRINTDAIDNSGGVDLSDHEVNLKIFFNHLRERKIISSEEEQNHWLEKVKEEVCQQVLA
NNYSQSLCLSLDRERYLRDTEPFMELADRLENSGLLDRLSDTFPYRKEVLARHGEGLTRP
ELAVLVSYSKTQLYQILLEQPDILSEPFLQEFAISYFPRAINEQFGNHIYDHPLGKEITA
TILCNTIIDHTGCSFLTWVEELKDIPIAHHPMVAYLVFNKILEGNTLRTQIYALDTIIPA
SRQYSLLLQFEDTLANFCHWNLANNKQIIPNEKTLSSFHYYLEQYELYQEETLTKSEDQP
FKERVRKLIEEGFSAKISRRIALLDRLTDFPLLVELASTSGKEFSLVVSIYEAVSNYLGY
SEVKEILHQVPVRNRWEHRAITTFRERFEVYLSNLALAILAAPDQGIANFFSTTTRQQRL
LQYQRIREELRETPPTDLLPFTVLSRKLETLIQG
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatttttgtggaagtccgtgaatcccgggcaacctatagcgatcacgaaaaaaaa
ataaacgagatccattcatttttagagcagcagagtaaaattcatggaaaacgatttctt
aaagcgcttgccacaatacttattactcctgactcttttcttctttctattcccacttat
cacctagcttctttgataacagatttttttgatctcattgaggcacggggaaaaaaaatt
gcagcacattgttttccctttccggagaaaaccggtacgttattgctgataagctcgccc
tatgcttcctatctagtagaatccctcggggcttcaaaagaagcacaagatatcgacttt
catctcatggcctaccatgccttgatgataaaacgtcgtgacaggaaaattattgacttg
ggaacagctgataagtctggtcccaaagagtcattgatccttctaaagcttgaagatatt
aatgaaaaaaaattccaagattttgctgcgactattcaaaaaatagtctcaaaaacttta
caagtccaaagtgataaggaaaatattgctgcccaggttaggcaattagagcaggcgccg
tcccttcaagcatggaaaagttttttaatttggtgccaacaaggcgcttttattccattt
tcctatcattgctttatcgtaaattctcaatccggtaaaaaaattgttattcaagaacaa
aatgataaacgtttgggattaccctttgactccctattagaatcaacaaaagaagaaaac
gtttcttccttattaactattttgaatcctgaagagattcagcgggaattaccagttctt
gttcagaaaactaggataaaaagtcccctttaccattccgaatacttaacctatatgggc
attagagaacctctggaaaaagggcaaatcaaggaacatgctttgataggcttgttttct
gagaaagcattcgctggcgataccatgaatatttctgcattgcgagataaagcagagcaa
agcttaaaacagttacgtctgcttaccgtagaccacgaatacaataagcttattgagtta
ctccattttttccctaaagtagagctcttttttatgggcgaggtgcaattacaaattatc
gctcgctccttgctgccttttctttaccgctcagacacggttaagctactgatccttgca
agccctagccctacccgaatctcgactcttattcttattccccaaggatttttcgatgaa
tcccatttaagagacatggagatttatctctgccaagagcttgcggccatccttgaaaat
tcccagctgattcggggaatccacagccattatatcggcttacacttgactttaattccc
caaaaggaagaagtgcttattcctcttgaacagctagaaaataccctcacccgaattgct
aaaccctggaattataaacttcaagtgttgctagaacaggcgatgggaaaagaacaaggg
gaggttttatggaataaatatggtaaaggatttttaccagaatatcaggtattaactccg
ccccaagcagctctccaagatatcaagggattagaacgcgtcctagaaacggggcaacaa
ttcattgatttatgggaatccccttacgaactatccaaggaacattatcgtcttcagttt
tatagctctcaggagagcttgcttgatgaactcatgccggtgttaaaaaatttgggttta
agagtaatcgatcaggttcgatttacccttgaagtagaaaaccgcggattttttatcaaa
agtttttctataaaagccgccaaagaaacggctaagccgctttcttccctgcgcgttccg
cttctagacgccttaggcgctttgttccgcggcgaagtagacgatgatcccttgaatgaa
ctgttggtactgactggactctcctggaaggaaatcgatatattccgcagctatcggaat
tactactttcaacttggcacacattttaccctctcccgtttccaccaatcccttagccat
aatccccaagtggccttgcttttatgccgctattttgaggcccggtttcgccccgaccct
caatgggacgatccggtgcgacgggaagaggaaggactacttcctatccgtctggaacta
gctaccgccctcaagtcggttacagacgtcaatgaagatcgtattctgcggactctattt
aatcttattgatgctaccgtacgcaccaacttttattaccggcataaacaaagggattac
tttctttctttcaagattagcagcttaggcgttattgatatgccccctcctaggcccctg
tacgaaatctatatccattccgccactgtggaagggattcatttgcgcggtggacgggtg
gcgcggggggggcttcgctggtcggatcgtcccgatgacttccgaaccgagatcctcggg
ttgatgcgcacccaaatgatgaaaaattcactcattgttccagtgggtgccaaaggaggt
tttattgtaaagcgctcctttagttcccgcgaggaaggggcaaaactagctaaacaggcc
tatattacctttatccagagcctcctcgatcttaccgataatcgggaaggaagccaggtt
gtccgcccccccaaagtggttgcctatgacgaagatgacccttacctggtcgttgccgcc
gataaaggcacggctcatctgcccgataccgccaatgaggttgctcaggagtatcatttc
tggctggatagtgccttcgccagtgggggcgcctttggataccatcataagaagttggga
atcacagctcgtggcgcctgggagtgcgtaaagcggcattttcgtgagctagatcttgat
attcaaacccaaccctttaccgctataggcattggtagcatggacggggatgtttttggc
aatggcatgctactctcccgccagatacgcttactagccgcctttggacccgggcatatt
tttattgatcccgagccagacccggaagtttcctatagagaacggaaaagattatttaag
ctacccggttcctcctggaacgactatgacgacaccttgatttccgagggaggaggcatt
ttccctcgccgggctaaggatattcctctttccccccaagtgcgctacttgctaaagacg
cggcacctatccatggatggtgaaggactgattcgcttactcctgacaaccccggttgat
ctgctctggtttggaggtatcggcacctatgtcaaagcgagtacagaaaaacacatcgag
gtgggtgaccgcaccaatgacacggtccgagtcgatgcttcacaactacaagcgcgggta
gtaggcgaaggtgccaacttgggttttactcaaaggggacgcatcgaatacgccttagga
ggcggtcgtatcaatacggatgccattgataattccggcggcgtggatctttccgaccat
gaggttaatctcaagatcttttttaatcacttgagagaaagaaaaatcatctcttctgag
gaagaacaaaatcactggctcgagaaggtcaaggaagaagtatgccagcaggtgctagcc
aacaattatagtcaaagtctatgcttatcccttgatcgggagcgctacctgcgggacacc
gagccttttatggagctagcggatcgcttagaaaattctggcttacttgatcgtctttcc
gatacatttccctatcgcaaggaagtcttggcgaggcatggggagggtttgacccgtccc
gagctggctgttctggtatcctatagcaagacgcaactttaccaaattcttttagagcaa
ccagatattttgtccgagccgtttctgcaagagtttgctattagctattttccccgggcc
ataaacgagcagttcggtaaccatatatacgatcatcctctagggaaggaaattacggcg
actattttatgtaacaccattattgaccacacagggtgctcttttcttacctgggtagaa
gaattaaaagatattcctattgcccatcaccctatggtagcttatttagtattcaataaa
atcctagaaggaaataccctacgtacccaaatttatgctttagataccatcattcctgct
tctcgtcagtatagtttattattacagtttgaagatacactagcaaatttctgccactgg
aatctggctaataataaacaaattattcccaacgaaaaaacgctatcttcgttccattat
tatttagagcaatatgaactataccaagaagaaactttgactaaatccgaagatcaacct
tttaaagaaagggtaaggaagcttatagaggaaggtttttcagcaaaaatttcccgccgt
atcgctctcttagatcgtctcacagactttcctctattagtagagcttgccagtacttca
ggaaaagagttttctctcgtagtaagtatttacgaagcggtctccaattatctgggctat
tccgaggtaaaagagattttacaccaggtacccgtgcgtaatcgttgggaacatagagcg
ataaccacattcagagaacggttcgaagtttatctatcaaacttagctttagccatacta
gctgccccagatcagggcattgctaattttttctccacgacaacgcgtcaacagagatta
ttacagtaccaaagaatacgggaagaattaagggaaacccctcctaccgatttgcttccc
ttcacggtgctgagcagaaagttagaaaccttaattcaaggttaa
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