Nitrosococcus oceani: Noc_2979
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Entry
Noc_2979 CDS
T00281
Name
(GenBank) PAS sensor, serine phosphatase RsbU regulator of sigma subunit
KO
K07315
phosphoserine phosphatase RsbU/P [EC:
3.1.3.3
]
Organism
noc
Nitrosococcus oceani
Brite
KEGG Orthology (KO) [BR:
noc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
noc03021
]
Noc_2979
Enzymes [BR:
noc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.3 phosphoserine phosphatase
Noc_2979
Transcription machinery [BR:
noc03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Noc_2979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_9
PAS
PAS_4
SpoIIE
PAS_3
PAS_8
Diguanyl_cycl_sensor
PAS_10
PAS_7
PAS_12
MEKHLA
PAS_13
ZT_dimer
Motif
Other DBs
NCBI-ProteinID:
ABA59421
UniProt:
Q3J6X5
LinkDB
All DBs
Position
complement(3369303..3371567)
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AA seq
754 aa
AA seq
DB search
MLIGEDTEMPVNKRKEEQNCDLLWALLNNAADGIIVIDEEGRIILTNTATEHFFGYRQQE
MIGQDMRKLIPDYDKCLTDHEKIISSEREVTGRRKDGNTFLAHLSISEIQHGGQRLFAGV
IRDFTTHKQGEIDAQRLAAIVESSEDAIISKTLDGIVISWNSAAQRIYGYSAEEICGQSI
SILAPPDRADEIPQILQHIRRGERIKQFETVRMRKDGREMFVSLTISPIKNSQGSITGAA
TIARDITRRKQREEKLLWLSRALEQSPVAVTITDTAGNIQYVNAKFTQLTGYHREEIIGR
NPRILQSGKTSLEEYQQLWSTIISGREWRGEIQDKKKNGEIYWILEQISPIKNTQGEITH
FLAIEEDISERKQIEKALQESEERFRQVAKMTGEWIWERDSSGRFIYCSGAVKEILGYEP
KEMFGKHYSEFFTLEAQEGKPCKSPQSGKRFFRIVCCYRHKDGREVFTESSGEPLLDERG
QIVKWRGLDRDITKRLEAQELIRRAQISLAVTRNELRIAQQIQESLLPTESLVLPEVQVV
GHCLPASQVGGDYFDYYYRQSDNTVDVTIADVSGHSVGPALFMVETRSALKTQIRSKFTA
ANTLAALNDSLYEDLNGADHFITMFYMQYHIATGEINYASAGHNPPLLLRRNEAVCNKLE
ADGLIFGVKKEVSFEEKRTFLKKGDLVFLYTDGIVEAESKQGEFFGIHRLSKILVTHRHL
AAQELIKVIVKDLQGFCESKNFRDDATMVILKVM
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgttaatcggcgaagatactgagatgccagtaaacaaaaggaaggaggaacagaattgc
gatctgctttgggctctgctcaataatgccgccgatgggatcattgttattgatgaagaa
ggacgcattattctaacgaatacagctactgaacatttttttggttaccggcagcaagaa
atgataggccaggatatgcgcaagctcatacctgattatgataaatgccttacagatcat
gagaagatcattagttctgaacgcgaggtcacgggccggcgtaaggatggcaacactttc
cttgcgcatctatcgatttccgagattcagcacggggggcagcggctttttgctggcgtt
attcgcgactttactacgcacaagcagggtgaaatagatgctcaaaggctggcggccatc
gttgaatcatccgaagacgctattattagcaagactctcgatggcattgttattagctgg
aattccgctgcccagcgaatatatggttatagcgctgaggaaatttgtggccaatctatt
tctattcttgcgccccctgatcgagctgatgagataccccaaattctccagcatatccgg
cgcggcgagcgcattaagcagtttgagacggtgcgcatgcggaaggatggcagagaaatg
ttcgtttctcttaccatttctcctatcaaaaacagccagggttctatcactggggctgca
accatcgctcgggatattacccggcgtaaacaaagagaagaaaaattgctgtggctatcc
cgagcgctagagcaaagccccgtggcggtaactattacagataccgcaggtaatattcag
tatgtgaatgctaaattcactcaattaactggttaccaccgggaagagattattgggaga
aatccacgcatcctgcaatcaggaaagacttcgctggaagaataccaacaattatggagc
actattatttctggaagagaatggcgaggggagatacaagacaaaaaaaagaatggggaa
atctattggatattggaacaaatttcacctattaagaacactcaaggtgaaattacccac
tttcttgctattgaggaagatatttccgagcgtaaacaaattgaaaaggcccttcaagag
agtgaagaaagatttcgtcaggttgctaagatgaccggcgagtggatatgggaacgggat
tcttccgggcgtttcatctattgtagtggggcagttaaggaaatactgggctatgagccc
aaggaaatgtttggcaagcattacagtgagttttttaccctagaagctcaggagggcaaa
ccttgtaaaagtccgcagagtggaaagcgattttttcggatcgtttgttgctatcgccac
aaagatggccgtgaagtttttacggagtctagcggcgaaccccttctggatgaacgaggc
caaatcgtcaagtggcggggtcttgatcgagatatcaccaaacggcttgaagcccaagaa
ttgatccgacgggcacaaataagccttgcggtaacacgcaacgagttgaggatcgcacag
caaatccaagaatctttactgcctacggaatctctggtgctgcctgaagtccaggttgtt
ggtcattgtctccctgcctctcaggtaggaggagactattttgattattattatcgccaa
tctgataataccgtggatgtgaccattgccgatgtctctgggcattctgttggtccagcc
ctctttatggttgaaacccgtagcgcgctgaaaacacaaatccgatcaaaattcaccgcc
gctaatacccttgctgctttaaatgattcactttatgaggacttaaatggagctgatcat
ttcattaccatgttttatatgcagtaccatattgcgacgggagaaattaattatgcaagc
gcaggccataatccccctttgctattacgccgtaacgaggcagtatgcaataagttagaa
gcggatggattaatttttggagttaaaaaagaagttagctttgaagagaagagaactttt
ttaaaaaagggagatctagtatttctctatacggatggcatcgtagaagcagagagtaaa
caaggtgagttttttggtatccaccgtttaagtaaaatacttgttacacatcgtcatctg
gcagcacaggagcttatcaaagtcatcgtaaaagatttacaaggattttgcgaaagcaaa
aattttagggatgatgccactatggtgattttaaaagtaatgtaa
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