Nocardiopsis sp. LDBS0036: UIS43_12530
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Entry
UIS43_12530 CDS
T11195
Name
(GenBank) bifunctional FO biosynthesis protein CofGH
KO
K11779
FO synthase [EC:
2.5.1.147
4.3.1.32
]
Organism
nocb Nocardiopsis sp. LDBS0036
Pathway
nocb00680
Methane metabolism
nocb01100
Metabolic pathways
nocb01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
nocb00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
UIS43_12530
Enzymes [BR:
nocb01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.147 5-amino-6-(D-ribitylamino)uracil---L-tyrosine 4-hydroxyphenyl transferase
UIS43_12530
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.32 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase
UIS43_12530
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
CofH_C
Motif
Other DBs
NCBI-ProteinID:
XEA88272
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Position
complement(3010458..3013085)
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AA seq
875 aa
AA seq
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MSGANDPAPVPSPTPSAMRRALARARDGKTLDVTEAEVLLHARGEDLDVLLEHAGRVRDA
GLEAAGRPGVVTYSRKVFVPLTRLCRDRCHYCTFATVPGRLDAPFLSPDEVLDIARRGAG
MGCKEALFTLGDRPEDRWKQAAEWLNAHGYDDTLSYVRAMAIMVLEETGLLPHLNPGVLT
WADLQRLKPVAPSMGMMLETTSTRLFTEKGQAHYGSPDKDPAVRLRVLEDAGRSSVPFTT
GILLGIGENTAERAESIFAMRGASRRYGGVQEVIVQNFRAKPATAMMHRPDAEREEMAAA
IAVTRLVMGPRAHVQAPPNLIGAEHGGVDEYGLMLRAGIDDWGGVSPLTPDHVNPERPWP
QIDDLAARTAAHGFALRERLTVYPEYVLAGEPWLDPRVAGHVAALADPETGLAREDAPVV
GRPWQEPEAVLVSSGRTDLHTGIDAEGRTADRRGDFDAVYGDWDELRSGVDREGAVPRRF
DPDIAAALRSAESDPAGLSDDAALALLHADGAELEALTDLADRVRRDAVGDDVTYVVTRN
INFTNVCYTGCRFCAFAQRRTDADAYTLSLEQVADRAEEAWKAGATEVCMQGGIHPDLPG
TAYFDIAAAVRERVPDMHVHAFSPMEVVNGAARTNLPVREWLLRAREAGLGSVPGTAAEI
LDDEVRWILTKGKLPAAEWIDVITSAHDLGIPTTSTMMYGHVDSPRHWVAHIKLLRSLQE
RSVERNGRRGFTEFVLLPFVHTNAPIYLAGLARTGPTVRENRAVHALARLLLHGHIDNIQ
CSWVKLAEDTCRQLLSGGVNDVGGTLMEETISRMAGSGQGSFKTISDIRALVEPTGRPVR
QRTTAYGPVPQERQRAAEASDGVAPSVRRPSLPLV
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtgcgaacgacccggcccccgtcccctccccgaccccgtccgccatgcgcagg
gccctggcccgcgcccgggacggcaagaccctcgacgtcaccgaggcagaggtactcctg
cacgccaggggcgaggacctggacgtcctcctcgaacacgccggaagggtgcgcgacgcc
gggctggaggccgcgggccgccccggggtcgtcacctacagccgcaaggtgttcgtcccc
ctgacccgcctgtgccgcgaccgctgccactactgcacgttcgccacggtgcccggccgc
ctcgacgccccgttcctgtcgcccgacgaggtcctggacatcgcccggcggggcgccggg
atgggctgcaaggaggccctgttcacgctcggcgaccggcccgaggaccgctggaagcag
gccgccgagtggctcaacgcccacggctacgacgacaccctgtcctacgtgcgggccatg
gccatcatggtgctggaggagaccggcctgctcccgcacctgaacccgggcgtgctcacc
tgggccgacctccagcgcctcaagcccgtcgccccctccatggggatgatgctggagacc
acctccacccggctgttcaccgagaagggccaggcccactacggcagcccggacaaggac
ccggcggtacggctgcgcgtgctggaggacgccgggcgctccagcgtccccttcaccacc
ggcatcctcctgggcatcggtgagaacaccgccgagcgcgccgagtcgatcttcgcgatg
cgcggcgcctcgcggcgctacggcggcgtccaggaggtcatcgtgcagaacttccgcgcc
aagcccgcgaccgcgatgatgcaccggcccgacgccgaacgcgaggagatggccgccgcc
atcgccgtcacccgcctggtcatggggcccagggcgcacgtgcaggcgccgcccaacctc
atcggcgccgagcacgggggcgtggacgagtacgggctgatgctgcgcgcggggatcgac
gactggggcggggtctccccgctcacccccgaccacgtcaacccggagcggccctggccg
cagatcgacgacctcgccgcgcgcaccgccgcccacggcttcgccctgcgcgagcggctc
accgtctaccccgagtacgtcctggccggggagccctggctggacccgcgcgtggccggg
cacgtggccgccctcgccgaccccgagaccggcctggcccgcgaggacgcgcccgtggtg
ggccgcccctggcaggagcccgaggcggtgctggtctcctccggccgcaccgacctgcac
acggggatcgacgccgaggggcgcaccgccgaccgccgcggcgacttcgacgccgtctac
ggggactgggacgagctgcgctccggcgtggaccgcgagggggccgtgccgcgcaggttc
gaccccgacatcgcggcggccctgcgcagcgccgagtccgaccccgcggggctgtccgac
gacgcggcgctcgccctgctgcacgccgacggggccgagctggaggcgctgaccgacctg
gccgaccgggtgcgccgggacgcggtcggcgacgacgtcacctacgtcgtgaccaggaac
atcaacttcaccaacgtctgctacaccggctgccgcttctgcgcgttcgcccagcgccgc
accgacgccgacgcctacacgctctccctggagcaggtcgccgaccgcgccgaggaggcc
tggaaggccggggcgaccgaggtgtgcatgcagggcggcatccacccggacctgcccggc
accgcctacttcgacatcgccgccgccgtgcgcgagcgcgtcccggacatgcacgtccac
gcgttcagcccgatggaggtggtcaacggggcggcgcgcaccaacctgccggtccgcgag
tggctgctgcgcgcccgcgaggccgggctcggctccgtgccgggcaccgccgccgagatc
ctcgacgacgaggtccgctggatcctcaccaagggcaagctgcccgcggccgagtggatc
gacgtcatcacgtccgcgcacgacctgggcatccccaccacgtccacgatgatgtacggg
cacgtggactcgcccaggcactgggtggcgcacatcaagctgctgcgctccctccaggag
cggtcggtggagcgcaacggccgccgggggttcaccgagttcgtcctgctgccgttcgtg
cacaccaacgcgcccatctacctggccgggctggcccgcaccgggccgacggtccgggag
aaccgcgccgtgcacgccctggcccgcctgctgctgcacgggcacatcgacaacatccag
tgctcgtgggtcaagctcgccgaggacacctgccgccagctgctctcgggcggggtgaac
gacgtcggcggcaccctgatggaggagaccatcagccggatggccgggtcgggccagggg
tcgttcaagaccatcagcgacatccgcgccctggtcgagccgacgggccgccccgtccgc
cagcgcaccacggcctacggtccggtgccgcaggagcgccagcgcgcggccgaggccagc
gacggcgtggcccccagcgtccggcgcccctcgctgccgctggtctag
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