Nocardiopsis sp. LDBS0036: UIS43_17085
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Entry
UIS43_17085 CDS
T11195
Name
(GenBank) thiopeptide-type bacteriocin biosynthesis protein
KO
K20483
class I lanthipeptide synthase [EC:
3.13.2.4
]
Organism
nocb Nocardiopsis sp. LDBS0036
Pathway
nocb02020
Two-component system
nocb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
nocb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
UIS43_17085
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
UIS43_17085
Enzymes [BR:
nocb01000
]
3. Hydrolases
3.13 Acting on carbon-sulfur bonds
3.13.2 Thioether and trialkylsulfonium hydrolases
3.13.2.4 lanthipeptide synthase
UIS43_17085
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lant_dehydr_N
Lant_dehydr_C
Motif
Other DBs
NCBI-ProteinID:
XEA83963
LinkDB
All DBs
Position
complement(4053739..4056702)
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AA seq
987 aa
AA seq
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MSGPDFGLVRVPLLSVEESARMVAAGDVHDPVAAMAVDLAADPHLRTASASEERARATLL
RYLARMGGRATPYGLFAGTAPLSVGDRRDLETDRRDRHRVRVRVDVRALEETVADALADA
DPDHVPLRLNPLAGVGPSAVRFAAPGDATAAVVSVRRTEAIDTALEVLGGAEMSADDLAE
ALSERLPGGEPDRLRAFVRGLRDRGLLQPSDGLIAPGDEPADRAVRLLDAVGDRDRAAAV
RVLLADAAGERPFEPGLRDRLDTAWDRAADHAPALARTRYAERFDLHPELAMRAASLDRR
TVADLRSAVRRLTALSSPGGGPGFDMASFRAAFAQRFEDAEVPLLSALDLESGVLRPARR
GASELAARAGLRAGSRPAEPTVNPELLDLLGRWTADGGHLDGGSVDIAHLPESDTDGSRA
LLAVLLGDADPSSHDGPHSMLVGGVGRAPHALVARFGLHRPAVADRVREQVDRARGRHGA
ADPARNPLHAELVYHPGGRIGNVLVRPRVLDETIALTGAHAGTLHLDRLLLRLCPDGFRL
RDARTGRPVLVELNTAHNVDFHGLDPVYAVLGHLATSGGAGWSWGPLARLPHLPRVTCGR
VVVTPERWLLRPGDVAAVLSAPSPAAALRDRLPGLGGRTWVGTGEYDHVLPVDLREDASV
RAALARAGERDTAFVEMPQAEAPAVRGPGGGHVAEVVVPTGPVLREPPGTGAGTAVLDRG
HGRAWIYARLYCGHATADQVVARAHRLSSDLRAAGEADQWFFLRYQDGDGYHVRVRVRPA
EPAARPGVLTAVDALGARLAAEGLVSRVVLDEYVPEVARYGGTEGLRAAEGLFTASSDRV
AAALPELADESARLYRAVADVTHWCTELFAAFDEREEFLRACQGGLDVAPTREGNRLGKF
ARTHEAALRAHLEGVRPDEGVAKALGALAAALEPGTGTRDRWSVFGSALHLHLNRTFAFD
AVRMEYLAHELARRHLRRLHALEGRKR
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgggccggacttcggcctggtccgcgtccccctgctcagcgtcgaggagtccgcc
cgcatggtcgccgcgggcgacgtccacgaccccgtcgccgccatggccgtcgacctggcc
gccgacccccacctgcgcaccgcgtccgcgtccgaggagcgcgcccgcgccaccctgctg
cgctacctcgcgcgcatgggcgggcgcgccaccccctacgggctgttcgccggaaccgcg
ccgctgtcggtcggggaccgccgcgacctggagaccgaccggcgcgaccggcaccgcgtg
cgggtacgcgtggacgtgcgcgccctggaggagacggtcgccgacgccctcgccgacgcc
gaccccgaccacgtccccctgcggctcaaccccctggccggcgtcggtccctccgccgtg
cgcttcgccgctccgggcgacgccaccgcggccgtggtgagcgttcggcgcaccgaggcc
atcgacaccgccctggaggtcctcggcggcgccgagatgagcgccgacgacctcgccgaa
gcgctctccgagcggctgcccggcggggagcccgaccgcctgcgcgccttcgtgcgcgga
ctgagggacaggggcctgctccagccctccgacggcctgatcgcccccggtgacgagccc
gccgaccgggccgtgcgcctcctggacgccgtcggcgaccgcgaccgggccgccgccgtg
cgcgtcctgctggccgacgccgcaggggagcgccccttcgagccggggctgcgcgaccgt
ctcgacaccgcctgggaccgagccgccgaccacgcgcccgccctggcccggaccaggtac
gccgaacgcttcgacctgcaccccgaactcgccatgcgcgccgccagcctggaccggcgc
accgtcgccgacctgcgctccgccgtgcgccgcctcaccgccctctcctcccccggcggc
ggcccaggcttcgacatggcctccttccgcgccgccttcgcccagcgcttcgaggacgcc
gaggtgccgctgctgagcgcgctggacctggagtcgggcgtgctgcggcccgctcggcgc
ggcgcctccgaactcgccgccagggcgggcctgcgcgccggttcccgccccgccgaaccc
accgtcaaccccgagctgctcgacctgctcggacgctggaccgccgacggcggccacctc
gacggcggctccgtggacatcgcccacctgcccgagtccgacaccgacggctcccgcgcg
ctgctggccgtcctgctcggcgacgccgacccctcctcccacgacggaccgcacagcatg
ctcgtcggcggggtcggccgcgccccccacgccctggtggcccggttcggcctccaccgc
cccgccgtcgccgaccgcgtccgggagcaggtcgaccgcgcccgcgggcggcacggagcc
gcggaccccgcgcggaaccccctccacgccgaactcgtctaccacccgggcggacgcatc
ggcaacgtcctggtgcgcccccgcgtgctggacgagaccatcgccctgaccggcgcccac
gcgggcaccctgcacctggaccggctgctcctgcgcctgtgcccggacggcttccgcctg
cgcgacgcccgcaccggccgacccgtcctcgtggagctcaacaccgcccacaacgtcgac
ttccacggcctggacccggtctacgcggtgctgggccacctggccacgtccggcggagcg
ggctggtcgtggggcccgctggcccgtctgccccacctgccccgcgtcacctgcggccgg
gtcgtggtcacccccgagcgctggctgctgcgccccggggacgtcgccgcggtcctgtcc
gcgccctccccggccgccgcgctgcgcgaccgcctgcccggcctgggcgggcgcacctgg
gtgggcaccggcgagtacgaccacgtgctccccgtggacctgcgcgaggacgcctcggtg
cgcgccgccctggcacgcgccggcgaacgcgacaccgctttcgtggagatgccccaggcc
gaggcgcccgccgtgcgcggccccggcgggggccacgtcgccgaggtggtcgtgcccacc
gggcccgtcctgcgcgagccgcccggcaccggcgcggggacggccgtcctggaccgcgga
cacggccgggcctggatctacgcgcgcctgtactgcgggcacgccaccgccgaccaggtg
gtggcgcgcgcccaccggctctcctcggacctgcgcgccgccggtgaggccgaccagtgg
ttcttcctccgctaccaggacggggacggctaccacgtgcgggtgcgggtccgcccggcc
gaacccgccgcgcggcccggcgtgctgaccgccgtggacgccctcggggcccggctggcc
gccgagggcctggtcagcagggtcgtcctggacgagtacgtgcccgaggtggcgcgctac
ggcggcacagagggcctgcgggcggccgaggggctgttcaccgcctccagcgaccgcgtc
gccgccgcgctgccggagctggccgacgagtcggcccgcctctaccgggcggtcgccgac
gtcacccactggtgcaccgagctgttcgccgccttcgacgagcgcgaggagttcctgcgc
gcgtgccagggcggtctggacgtggcccccacccgcgagggcaaccgcctcggcaagttc
gcccgcacgcacgaggccgccctgcgcgcccacctggagggggtccgccccgacgagggc
gtggccaaggccctgggcgcgctggccgccgcgctggagcccgggaccgggacccgcgac
cggtggtcggtgttcgggtcggcgctgcacctgcacctgaaccggaccttcgccttcgac
gcggtgcgcatggagtacctggcgcacgaactcgcccggcgccacctgcgccgtctgcac
gcactggagggcaggaaacgatga
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