Nocardiopsis sp. LDBS0036: UIS43_18655
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Entry
UIS43_18655 CDS
T11195
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
nocb Nocardiopsis sp. LDBS0036
Pathway
nocb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nocb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
UIS43_18655 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nocb03400
]
UIS43_18655 (nth)
Enzymes [BR:
nocb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
UIS43_18655 (nth)
DNA repair and recombination proteins [BR:
nocb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
UIS43_18655 (nth)
Prokaryotic type
UIS43_18655 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
DUF7730
HHH_5
TPR_6
Motif
Other DBs
NCBI-ProteinID:
XEA84247
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All DBs
Position
4407689..4408435
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AA seq
248 aa
AA seq
DB search
MMPRDTPDATEPTTTPTGESRLALVRRARRMYRELIELYPDAHCELNFTTPLELLVATIL
SAQCTDKRVNQVTPALFARYPDAEGYASARREELEEMIRSTGFFRAKANSLIGLGQELCE
RHGGEVPRKLSDLVKLPGVGRKTANVLLGNAFDVPGITVDTHFGRLVRRFGWTDEEDPVK
VEHEIGALFPRRDWTMLSHRVIWHGRRVCHSRKPACGACGLARLCPSFGEGPTDTATATK
LLRMRSFS
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgatgccccgtgacacaccagacgcgaccgagccgacgaccacgcccaccggtgagagc
cggctcgcgctggtccgccgcgcccgcaggatgtaccgggaactcatcgagctgtacccg
gacgcccactgcgagctgaacttcacgacccccctggagctgctggtcgcgacgatcctg
tccgcccagtgcacggacaagcgggtcaaccaggtcacccccgccctcttcgcccgttac
cccgacgcggagggctacgcctcggcgcggcgggaggagctggaggagatgatccgctcg
accggcttcttccgggccaaggccaacagcctcatcgggctcgggcaggaactgtgcgaa
cggcacggtggagaggttccgaggaaactctccgacctggtcaaactacccggtgtaggg
cgaaagaccgcaaacgtactgctcggtaacgccttcgatgtgcccggtatcactgttgac
acccatttcgggcggctcgtccgtcgtttcgggtggaccgacgaggaggacccggtcaag
gtcgagcacgagatcggcgcgctcttcccgcgccgggactggacgatgctctcccaccgc
gtcatctggcacggccgccgggtctgccactcccgcaagcccgcgtgcggggcctgcggc
ctggcccgtctgtgcccctccttcggagaggggcccacggacaccgccaccgcgaccaag
ctgctgcggatgcgctccttctcctga
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