Nocardiopsis sp. LDBS0036: UIS43_26210
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Entry
UIS43_26210 CDS
T11195
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
nocb Nocardiopsis sp. LDBS0036
Pathway
nocb00300
Lysine biosynthesis
nocb00550
Peptidoglycan biosynthesis
nocb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nocb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
UIS43_26210
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
UIS43_26210
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nocb01011
]
UIS43_26210
Enzymes [BR:
nocb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
UIS43_26210
Peptidoglycan biosynthesis and degradation proteins [BR:
nocb01011
]
Precursor biosynthesis
Amino acid ligase
UIS43_26210
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
DUF1611
RraA-like
LpxD
YqeC
Motif
Other DBs
NCBI-ProteinID:
XEA85632
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Position
6166932..6168599
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AA seq
555 aa
AA seq
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MRPEHTPLRPLSALAALLGPDASLLRPDLGADRPPEVPDREVHVRGITHDSRQVGPGDLY
AALPGTRAHGADFAGQAAEAGAAAVLTDGDGAERAAATGLPVIVVPDVRAVLGTAASWVF
KDPAQDLLLIGTTGTSGKTTVTYLVESGLRHAGMRTGLVGTVEMRVGDERVVSSLTTPEA
TDLHGLFALMRERGVSAAAMEVSSHALALSRVGGTRYDVAVFTNLSQDHLDFHSDLRDYF
DAKARLFTPEYCDIAVVNADDRFGRALVDMVQADGRVPVTTFAVDGYTDADPATAMEADW
RAVDVRLGAMGSAFRIVGPGGMEANASVALPGPFNVSNAMAAIVGLVEAGLPLETAIAGV
AAAPGVPGRMEPVVANAVPHAFQDFTALVDYSHKPGAIEAVLTALRATTEGGLTMVVGCG
GDRDRAKRPLMGEAAARLSDQLVITNDNPRTEDPVSIAASMLEGVAKVPEEHRARVTVEF
DRAEAIRLAVERARPGDVVVVAGKGHETGQYVKGEVLPFDDREVLRAAIEDHLGMSARER
LGVALQDIHRVPDQG
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgcgacctgaacacacgccacttcgtccactgtccgccctcgcagcgctgctcgggccg
gacgcctccctcctgcgcccggacctgggcgcggaccgaccccccgaggtgccggacagg
gaggtgcacgtccgcggcatcacccacgactcccgccaggtggggcccggagacctgtac
gccgccctgcccgggacccgcgcgcacggcgccgacttcgccgggcaggccgccgaggcg
ggcgccgccgccgtcctcaccgacggggacggggccgagcgggccgccgccaccgggctg
cccgtcatcgtggtccccgacgtgcgcgccgtgctgggcacggcggcctcgtgggtcttc
aaggacccggcgcaggacctgctgctgatcggcaccaccggcaccagcggcaagaccacc
gtcacgtacctggtcgagtcgggcctgcgccacgccggaatgcgcaccggcctcgtcggc
accgtggagatgcgcgtgggcgacgaacgcgtcgtctcctcgctcaccacgcccgaggcc
accgacctgcacggcctgttcgccctcatgcgcgaacgcggcgtctccgccgccgccatg
gaggtctccagccacgccctggccctgagccgggtcggtggcacccgctacgacgtcgcg
gtcttcaccaacctgtcccaggaccacctggacttccactccgacctgcgcgactacttc
gacgccaaggcccgcctgttcacccccgagtactgcgacatcgcggtggtcaacgccgac
gaccgcttcggccgcgcgctcgtggacatggtgcaggccgacggccgcgtccccgtcacc
accttcgccgtggacggctacaccgacgccgaccccgccaccgccatggaggccgactgg
cgggccgtggacgtgcgtctgggcgccatggggagcgccttccgcatcgtgggccccggc
ggcatggaggccaacgcctccgtcgccctgcccggacccttcaacgtctccaacgcgatg
gccgccatcgtcggtctggtcgaggcggggctgccgctggagaccgcgatcgcgggtgtg
gccgccgccccgggcgtgcccgggcgcatggagccggtcgtggccaacgccgtgccccac
gccttccaggacttcaccgcgctcgtggactactcgcacaagcccggcgccatcgaggcc
gtcctgaccgccctgcgcgccaccaccgagggcgggctgaccatggtggtcggctgcgga
ggcgaccgcgaccgcgccaaacgcccgctcatgggcgaagccgccgcgcgcctgtccgac
cagctggtcatcaccaacgacaacccgcgcaccgaggaccccgtgagcatcgccgcgtcg
atgctcgaaggggtcgccaaggtgcccgaggagcaccgcgcccgggtcaccgtggagttc
gaccgggccgaggccatccgcctggccgtcgagcgcgcccgtcccggcgatgtggtggtt
gtcgccgggaagggtcacgagaccggtcagtacgtcaagggtgaggtgctgcccttcgac
gaccgcgaggtgctgcgcgcggccatcgaggaccacctcggcatgagcgcccgcgagcgg
ctgggggtcgccctccaggacatccaccgggttcctgaccagggctga
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