Nocardiopsis sp. LDBS0036: UIS43_27355
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Entry
UIS43_27355 CDS
T11195
Name
(GenBank) MFS transporter
KO
K08167
MFS transporter, DHA2 family, multidrug resistance protein
Organism
nocb Nocardiopsis sp. LDBS0036
Brite
KEGG Orthology (KO) [BR:
nocb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nocb02000
]
UIS43_27355
01504 Antimicrobial resistance genes [BR:
nocb01504
]
UIS43_27355
Transporters [BR:
nocb02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-2 (14 spanner) (DHA2) family [TC:
2.A.1.3
]
UIS43_27355
Antimicrobial resistance genes [BR:
nocb01504
]
Gene variants
Quinolone resistance genes
Transporter
UIS43_27355
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump QacA [MD:
M00714
]
UIS43_27355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
Motif
Other DBs
NCBI-ProteinID:
XEA85844
LinkDB
All DBs
Position
complement(6442514..6444280)
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AA seq
588 aa
AA seq
DB search
MSSAQTGNGTVGAAPALAGPREWTALAVLVLPVILISVDSTVLGFAVPALSEQLRPDAGQ
LLWIVDVYGFVLAGLLITMGSLGDRIGRRRLLMIGSAAFGAASLLAAFSPTAEVLIAARA
LLGLAGASLMPSTLSLLRNIFLDPRQRLLAIALWASGFSGGAALGPILGGWLLEHFFWGS
VFLINLPVMALILVLVPLLVRESRNPDSGRLDPLSVVLSMAAILPVVYGVKNLATEGLAV
VPVVSLAVGLGLGYLFVRRQKALDDPLIDVGLFRYRVFSVAVATNLMIVFSLVSSLFFLT
QYLQLVLGVSPMRAGFVLVPGLVLSVLAGLVAVRLSRHLSLATVIGGSLLVTATGFAVLV
FAPQGNVVTGVVLVTAGFALIATGSGFAETLTNGAIMAAAPPQRAGAASAISETAYELGA
ALGVALLGSVLTASYRANLTAVEGVPSGAVDAARETLGGAANAAAEVGGAAGDALMLAAR
TAFTDGMHLTSVIAVVIVLAAAAQAWVLLRGRGNPAVEPVEGPAEGALEETVEAVGTAGT
AGATVAAEAAGAEEAGGTTGAGQEPAPVAADPAAGDTQAAPERNRSDG
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgagttccgcccagaccggaaacggcaccgtcggcgcggcgcccgccctcgcgggcccg
cgcgaatggaccgcgctcgccgtcctggtcctcccggtgatcctgatctcggtcgactcc
accgtgctcgggttcgccgtccccgcgctcagcgagcagctgcggcccgacgcgggccag
ctgctgtggatcgtcgacgtctacggcttcgtccttgccggactgctgatcaccatgggc
tcgctcggcgaccgcatcggccggcgacgcctgctcatgatcggttcggccgccttcggc
gcggcctcgctgctcgccgcgttctcacccaccgccgaggtgctcatcgcggcccgcgcc
ctgctcggcctggcgggcgcctcactgatgccctcgaccctgtcgctgctgcgcaacatc
ttcctggacccgcgccagcgcctgctggccatcgccctgtgggcgtcggggttctccggc
ggcgcggcgctcggcccgatcctgggcggctggctcctggagcacttcttctggggctcg
gtgttcctgatcaacctgccggtgatggcgctgatcctggtgctggtcccgctgctggtg
cgcgagtcgcgcaaccccgactcgggccgcctggacccgctgagcgtggtcctgtccatg
gccgcgatcctgcccgtcgtgtacggcgtcaagaacctggccaccgagggcctggcggtc
gtcccggtcgtctccctggcggtcggcctgggcctgggctacctgttcgtccggcgccag
aaggccctggacgacccgctgatcgacgtgggcctgttccggtaccgcgtgttcagcgtg
gcggtggccaccaacctgatgatcgtgttctcgctggtgtcgtcgctgttcttcctgacg
cagtacctccagctggtgctgggcgtctcaccgatgcgggccggtttcgtgctggtgccg
ggcctggtgctgtcggtgctggcggggctggtggcggtgcggctgtcgcgccacctgagt
ctggccacggtgatcggcgggtccctgctggtgaccgcgacggggttcgcggtcctggtc
ttcgcgccgcagggcaacgtggtgaccggtgtggtgctcgtgacggcgggcttcgcgctg
atcgccaccggctccgggttcgccgagacgctgaccaacggcgcgatcatggcggcggcc
ccgccccagcgcgcgggcgcggcctcggcgatctccgagaccgcctacgagctgggcgcg
gcgctgggcgtcgcgctgctgggcagtgtgctgaccgcgtcctaccgggcgaacctgacc
gccgtggagggcgtgccctctggggccgtggacgccgcccgggagaccctgggcggggcc
gcgaacgccgccgccgaggtgggcggcgccgcgggcgacgcgctgatgctcgccgcgcgg
acggcgttcaccgacggcatgcacctgaccagcgtcatcgccgtggtgatcgtcctggcc
gccgccgcgcaggcgtgggtgctgctgcgcggtcggggcaacccggcggtggagccggtg
gagggccccgccgagggagccctggaggagacggtcgaggccgtgggcaccgccgggacc
gcgggggccacggtggccgccgaggccgcgggcgccgaggaggccggagggaccacgggt
gccgggcaggagcccgctccggtggccgccgaccccgcggccggtgacacccaggccgcg
ccggagcggaaccgctccgacggctag
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