Candidatus Nanohalococcus occultus: SVXNc_0405
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Entry
SVXNc_0405 CDS
T10160
Symbol
rpoF
Name
(GenBank) DNA-directed RNA polymerase subunit F
KO
K03051
DNA-directed RNA polymerase subunit F [EC:
2.7.7.6
]
Organism
nocc Candidatus Nanohalococcus occultus
Pathway
nocc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nocc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SVXNc_0405 (rpoF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nocc03021
]
SVXNc_0405 (rpoF)
Enzymes [BR:
nocc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SVXNc_0405 (rpoF)
Transcription machinery [BR:
nocc03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
SVXNc_0405 (rpoF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb4
Phage_term_smal
DUF6377
DUF4806
DUF1002
Motif
Other DBs
NCBI-ProteinID:
WEL19429
LinkDB
All DBs
Position
383066..383404
Genome browser
AA seq
112 aa
AA seq
DB search
MEVKEEEYVYPVEALEVLEDRDEESLNHEQKIALENLVRHCKVKDLETLEKLNEELSEIE
SLKEKHVFKLLEVVPKHESTVRAVFSKERVKLDDSDIEEILEICQSIETSDE
NT seq
339 nt
NT seq
+upstream
nt +downstream
nt
atggaagtaaaggaagaggagtatgtctaccctgtagaggctctagaagtcctagaagac
agagacgaagagtccctcaaccatgagcagaagatcgctctggaaaaccttgtcagacac
tgtaaggtaaaggatctggaaacccttgagaagcttaacgaggagctttcagaaatcgag
agcttgaaggaaaaacacgttttcaaactgctcgaagtagtgccaaagcacgaatcaacg
gtaagagcggttttctcaaaggaaagagtcaagcttgatgacagcgatatcgaagagatc
ctcgagatctgtcagagcatagagacctccgacgaataa
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