Candidatus Nanohalococcus occultus: SVXNc_0718
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Entry
SVXNc_0718 CDS
T10160
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
nocc Candidatus Nanohalococcus occultus
Pathway
nocc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nocc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SVXNc_0718 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nocc03400
]
SVXNc_0718 (nth)
Enzymes [BR:
nocc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SVXNc_0718 (nth)
DNA repair and recombination proteins [BR:
nocc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SVXNc_0718 (nth)
Prokaryotic type
SVXNc_0718 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH_5
HHH
Con-6
HHH_2
RecR_HhH
IMS_HHH
DUF3701
TarS_linker
Motif
Other DBs
NCBI-ProteinID:
WEL19732
LinkDB
All DBs
Position
complement(632718..633407)
Genome browser
AA seq
229 aa
AA seq
DB search
MSEENFYDEEYTERLNEIMDLLKEHYGVPEGARRDDPVDSLITTILSQNTTDQSRDKAKA
RLDEKFDSFQEILDADVEEVTDAVRIAGLGPTKAERIQTFLSMIKEERGEFSLDHVTDMG
KEEAKQYLQEFPGVGPKTAAVTLCFAFGMPVMPVDTHVHRLSQRLRLIPEGTPVEKAHDI
LEREVPDDRIYEFHINLIKHGRAVCTARNPTCQESFLAEYCVNCVCREN
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggaaaacttctacgacgaagaatatacagaaaggttaaacgagataatggat
ctcctgaaggaacactacggtgtgccggaaggcgccagaagggatgatccggtcgattca
ttgattacaacaattctgtcccagaacacgaccgatcagagcagggacaaggcaaaagcc
cggctggatgagaagttcgattccttccaggagatacttgatgcggacgttgaggaggta
actgatgcagtacggatcgccggtctcggacctaccaaagccgagcggatccagacgttt
ctatcgatgataaaagaagagcgcggagagttttccctcgatcatgtaaccgatatggga
aaagaagaggccaaacagtacttacaggagtttcccggggtcggacctaagacggccgcg
gtcacactctgctttgctttcggaatgccagtgatgcctgtggacacacacgtccatcgc
ttatcgcagaggcttcgtttgatacctgaaggcactccggttgagaaggctcatgatata
ctggaacgggaagtcccggatgatagaatatacgagttccacatcaacctgatcaaacac
ggccgagcagtctgtacagctaggaatccaacatgtcaggaaagctttctggcagaatac
tgtgttaactgcgtttgtagagaaaattga
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integrated database retrieval system
