Nocardioides sp. QY071: QI633_15490
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Entry
QI633_15490 CDS
T10893
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
nocq Nocardioides sp. QY071
Pathway
nocq00300
Lysine biosynthesis
nocq00550
Peptidoglycan biosynthesis
nocq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nocq00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
QI633_15490
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
QI633_15490
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nocq01011
]
QI633_15490
Enzymes [BR:
nocq01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
QI633_15490
Peptidoglycan biosynthesis and degradation proteins [BR:
nocq01011
]
Precursor biosynthesis
Amino acid ligase
QI633_15490
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
LpxD
Motif
Other DBs
NCBI-ProteinID:
WGX99941
LinkDB
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Position
complement(3210347..3211873)
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AA seq
508 aa
AA seq
DB search
MSATATRPARPPLTPLDAVARALGLATTHPGVDLGGMTLDSRRVQPGDLYAALPGSRAHG
ATFAEQAAASGAVALLTDAEGAALAAATGLPALVVDDPRHVLGAVAALVYGHPAARLRTV
GVTGTQGKTTVTRLLDGGLLAAGVRSAVIGTVGTRIAGEEVKTALTTPEAPDLHGLFARM
GELDVTACAMEVSSHALVMGRVDGVVFDVAVFTNLGRDHLDFHADVEDYFSAKARLFTPE
HARFGLVCVDDEHGRRLVAEASIPMRTYAVGTDADWTVSGVDQRPDGSTFTVHGPDGLTV
RGAVPLAGEFNVANALAAIAAAAEAGFDAQQVADGIGRAGGVPGRLERIDTGRDLTVVVD
YAHKPDAVDAVLRTLRPVTRGRLVVVIGAGGDRDRGKRPVMGAIAAELADLVVVTDDNPR
SEDPAAIRAAIIEGASLAGARSGAELLEIGDRREAIATALRGAGPGDVVLVAGKGHEAGQ
EVAGVVHPFDDREVVRELLAQLPAGGDA
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgccaccgccacccgccccgcccgcccgccgctgacgcccctcgacgccgtcgcg
cgggcgctgggactcgcgacgacccaccccggcgtcgacctgggcgggatgacgctggac
tcacgccgggtccagcccggtgacctgtacgccgccctgccgggctcgcgcgcccacggc
gccaccttcgccgagcaggccgccgcctccggcgcggtcgcgctgctcaccgatgccgag
ggcgccgcgctggccgccgcgaccggcctcccggcgctcgtcgtcgacgacccgcgccac
gtcctcggcgcggtcgccgcgctcgtctacgggcacccggcagccaggctgcgcacggtc
ggcgtcaccggcacccagggcaagaccaccgtcacccggctgctcgacggcggcctgctc
gcggccggggtgcgcagcgccgtgatcggcaccgtcggcacccgcatcgccggtgaggag
gtcaagaccgcgctgaccacgccggaggcgcccgacctgcacggcctcttcgcccggatg
ggcgagctcgacgtcaccgcctgcgcgatggaggtctccagccacgcgctggtcatgggc
cgcgtcgacggcgtggtgttcgacgtcgccgtcttcaccaacctgggtcgcgaccacctc
gacttccacgccgacgtcgaggactacttctccgccaaggcgaggctgttcacgcccgag
cacgcgcggttcgggctggtctgcgtcgacgacgagcacggccgccggctcgtggccgag
gcgtcgatcccgatgcgcacctacgccgtcggcaccgacgccgactggaccgtctccggc
gtcgaccagcgtcccgacggctcgaccttcaccgtccacggccccgacgggctgaccgtg
cgcggcgcggtcccgctggcgggcgagttcaacgtcgccaacgccctggccgcgatcgcc
gccgcggctgaggcgggcttcgacgcccagcaggtcgccgacgggatcggccgcgcgggc
ggcgtacccggtcgcctggagcggatcgacaccggccgagacctgaccgtcgtggtcgac
tacgcccacaagcccgacgcggtcgacgccgtgctgcggaccctgcgcccggtcacccgt
ggcaggctggtcgtcgtgatcggcgccgggggagaccgcgaccggggcaagcgccccgtg
atgggcgcgatcgccgccgagctggccgacctggtcgtcgtcaccgacgacaacccccgc
tccgaggacccggccgcgatccgggccgccatcatcgagggagccagcctggccggcgcc
cgcagcggcgcggagctcctcgagatcggcgaccgccgcgaggccatcgcgaccgcgctg
cgcggagccggacccggcgacgtcgtcctggtcgccggcaagggccacgaggcgggccag
gaggtcgccggcgtggtccaccccttcgacgaccgcgaggtcgtccgggagctgctcgcg
cagctgccggccgggggtgacgcgtga
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