Nocardioides sp. WV_118_6: ABFU82_09635
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Entry
ABFU82_09635 CDS
T10638
Name
(GenBank) bifunctional RNase H/acid phosphatase
KO
K22316
ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:
3.1.26.4
3.1.3.73
]
Organism
nocw Nocardioides sp. WV_118_6
Pathway
nocw00860
Porphyrin metabolism
nocw01100
Metabolic pathways
nocw01240
Biosynthesis of cofactors
nocw03030
DNA replication
Module
nocw_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
nocw00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
ABFU82_09635
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABFU82_09635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nocw03032
]
ABFU82_09635
Enzymes [BR:
nocw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.73 adenosylcobalamin/alpha-ribazole phosphatase
ABFU82_09635
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
ABFU82_09635
DNA replication proteins [BR:
nocw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
RNase H
ABFU82_09635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
His_Phos_1
RVT_3
RNase_H
Motif
Other DBs
NCBI-ProteinID:
XBB69551
LinkDB
All DBs
Position
complement(2003412..2004593)
Genome browser
AA seq
393 aa
AA seq
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MPSPAAVVVEADGGSRGNPGPAAYGAVLRDAATGAVIAEDARTLGVATNNVAEYSGLVAG
LHLAVDHAPGARVEVRMDSKLVVEQMSGRWKIKHADMRALAAEAAAIAPAGTTYTWVPRA
DNAHADRLANEALDGVREGVTVAGGASVPGDGIPDEPESAAEEASSPATGPGQPTTIVLV
RHGVTPHTTGRRFSGGLGGDNPSLSDEGRAQAAEVAAWLTELRDSIDVVVASPVRRTRET
ADIIGAVLGLPVAEEPGFAEMEFGEWDGLTFTEVAERDKDRLEAWFADMASPPPGGESFV
AVRERVLAGLDRVLTEHAGRTVVLVSHVTPIKTLVAHALDAPLETLFRMELAPAAVSVLA
FYPDPRTGEQKGSMRFFNALAPGRRTLRDTGRW
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
gtgccgagccccgccgcggtcgtcgtcgaggccgacggcgggtcgcgcggcaaccccggt
cccgccgcctacggcgcggtgctccgcgacgccgccaccggagcggtcatcgccgaggac
gcccgcacgctcggcgtcgcgaccaacaacgtcgccgagtactccggcctcgtcgccggg
ctgcacctcgccgtggaccacgcgccgggcgcgcgcgtcgaggtgcggatggactccaag
ctcgtcgtcgagcagatgtccgggcgctggaagatcaagcacgccgacatgcgcgcgctc
gcggccgaggcggcggcgatcgcgcccgccgggacgacgtacacctgggtgccgcgggcc
gacaacgcccacgccgaccggctcgccaacgaggcgctcgacggcgtccgcgagggcgtc
accgtggccggcggcgccagcgtccccggcgacggcatccccgacgagcccgagtccgcg
gccgaggaggcgtcctccccggcgaccggtcccggccagccgaccaccatcgtcctggtc
cgccacggcgtcaccccgcacaccaccggccgccgcttctccggcggcctcggcggcgac
aacccgtcgctgtccgacgagggccgcgcccaggccgccgaggtcgcggcctggctcacc
gagctgcgcgacagcatcgacgtcgtcgtggcctcgcccgtgcgccgtacccgcgagacg
gccgacatcatcggcgccgtcctcggcctgcccgtcgccgaggagcccggcttcgccgag
atggagttcggtgagtgggacggcctcaccttcaccgaggtcgccgagcgcgacaaggac
cgcctcgaggcgtggttcgccgacatggcctccccgccgccgggcggcgagtcgttcgtc
gccgtccgcgagcgcgtcctggccgggctcgaccgggtgctcaccgagcacgccgggcgc
accgtcgtcctggtcagccacgtgacgcccatcaagaccctcgtcgcgcacgccctcgac
gccccgctcgagacgctcttccggatggagctcgccccggccgccgtgtcggtgctggcg
ttctacccggacccgcgcacgggcgagcagaagggctcgatgaggttcttcaacgcgctc
gcgcccggacgccggacgctgcgcgacaccggccgctggtga
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