Nocardioides sp. WV_118_6: ABFU82_23370
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Entry
ABFU82_23370 CDS
T10638
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
nocw Nocardioides sp. WV_118_6
Pathway
nocw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nocw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ABFU82_23370 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nocw03400
]
ABFU82_23370 (nth)
Enzymes [BR:
nocw01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ABFU82_23370 (nth)
DNA repair and recombination proteins [BR:
nocw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ABFU82_23370 (nth)
Prokaryotic type
ABFU82_23370 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
XBB67020
LinkDB
All DBs
Position
4804399..4805115
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AA seq
238 aa
AA seq
DB search
MRPIDTSDETSTQLVRRARKIDRVLAETYPDAKAELDFDNAFECLVVTVLSAQTTDKRVN
AVRPTLFAAYPDPASMAAADRAHLEQIVGPLGFFRAKTESLLKLSAALVETYDGQVPGRL
EDLVTLPGVGRKTANVVLGNAFDVPGITVDTHFGRLARRLGFTDETDPVKVEHAVGALFP
KRDWTMLSHHLIWHGRRRCHAKKPACGACPVARWCPSYGTGPTDPVEAEKLVRTEGPN
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
gtgcggccgatcgacaccagcgacgagacgtcgacccagctcgtccgccgggcgcgcaag
atcgaccgggtcctcgccgagacctatcccgacgccaaggccgagctcgacttcgacaac
gccttcgagtgcctggtcgtcaccgtgctctcggcccagaccaccgacaagcgggtcaac
gcggtgcgcccgacgctgttcgcggcctatcccgacccggcgtcgatggccgcggccgac
cgcgcccacctggagcagatcgtcgggccgctgggcttcttccgggccaagaccgagtcg
ctgctcaagctgagcgccgccctcgtcgagacgtacgacggccaggtccccggccgcctc
gaggacctcgtgacgctgcccggggtcggccgaaagaccgccaacgtggtgctcggcaac
gccttcgacgtccccggcatcaccgtcgacacccacttcggccggctggcccgccggctc
ggcttcaccgacgagaccgatccggtcaaggtcgagcacgcggtcggcgcgctcttcccc
aagcgcgactggacgatgctctcccaccacctgatctggcacggccggcgccgctgccac
gccaagaagcccgcgtgcggggcctgcccggtggcgcgctggtgcccgtcctacggcacc
ggcccgaccgacccggtcgaggcggagaagctggtccggaccgaggggcccaactga
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