Nocardioides sp. TF02-7: MF408_07410
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Entry
MF408_07410 CDS
T10483
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
nof Nocardioides sp. TF02-7
Pathway
nof03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MF408_07410 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nof03400
]
MF408_07410 (nth)
Enzymes [BR:
nof01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MF408_07410 (nth)
DNA repair and recombination proteins [BR:
nof03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MF408_07410 (nth)
Prokaryotic type
MF408_07410 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
UMG93925
LinkDB
All DBs
Position
complement(1460953..1461669)
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AA seq
238 aa
AA seq
DB search
MRASGTKDETPTQLVRRARKINRVLAETYPDARCELDFDNPFELLVVTVLSAQTTDKRVN
AARPAIFAAYPDAKAMAAADRAHLEQLVGPLGFFRAKTESLLKLSAALVERYDGQVPPRL
DDLVTLPGVGRKTANVVLGNAFDVPGITVDTHFGRLARRFAWTEETDPVKVEHAVGALFP
KRDWTMLSHHLIWHGRRVCHARKPACGACPVARWCPAFGEGPTDPAEAAKLVRTEGRA
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
gtgcgggcgagcgggacgaaggacgagacaccgacccagctggtccgccgggcccgcaag
atcaaccgggtgctcgccgagacctatcccgacgcccgttgcgagctcgacttcgacaac
cccttcgagttgctcgtcgtcacggtgctcagcgcccagacgaccgacaagcgggtcaac
gccgcccggccggcgatcttcgcggcctaccccgacgccaaggcgatggccgccgccgac
cgcgcccacctcgagcagctggtgggcccgctcgggttcttccgcgccaagaccgagtcg
ctgctcaagctgagcgccgccctcgtcgagcggtacgacggccaggtgccgccccggctc
gacgacctggtcaccctccccggcgtgggccgcaagaccgcgaacgtcgtgctcggcaac
gcgttcgacgtgcccggcatcaccgtcgacacccacttcgggcggctcgcccgccggttc
gcgtggaccgaggagaccgacccggtgaaggtcgagcacgccgtcggcgcgctcttcccc
aagcgcgactggaccatgctcagccaccacctcatctggcacggccgccgggtctgccac
gcccgcaagcccgcgtgcggggcgtgcccggtcgcccgctggtgcccggccttcggcgag
gggcccaccgaccccgcggaggcggccaagctggtgcgcaccgagggcagggcatga
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