Novosphingobium sp. Gsoil 351: GKE62_09790
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Entry
GKE62_09790 CDS
T06443
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
nog
Novosphingobium sp. Gsoil 351
Pathway
nog03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GKE62_09790 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nog03400
]
GKE62_09790 (nth)
Enzymes [BR:
nog01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GKE62_09790 (nth)
DNA repair and recombination proteins [BR:
nog03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GKE62_09790 (nth)
Prokaryotic type
GKE62_09790 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
HHH_8
Motif
Other DBs
NCBI-ProteinID:
QGN56396
UniProt:
A0A6I5X5U2
LinkDB
All DBs
Position
complement(2029969..2030601)
Genome browser
AA seq
210 aa
AA seq
DB search
MFEFFRRLAEDNPDPLTELEFGNTYQLLVAVVLSAQATDVGVNKATRALFREVTTPAQMV
ALGEDGLKAHIKTIGLFNAKAKNVIALSEKLIAEHGGEVPRNRDALTALPGVGRKTANVV
LNCAWGEETFAVDTHVFRVGNRTGLARGKTPEAVEAQLDKKVPAPFRQGAHHWLILHGRY
TCKARTPECWRCVVADLCAFRPKTAAVEKK
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
ctgttcgaattcttccgccgcctggccgaggacaaccccgatccgcttaccgagctcgag
ttcggcaacacctatcagttgctggttgccgtcgtgctgtcggcgcaggcgaccgacgtc
ggggtcaacaaggcgacgcgcgcgttgttccgcgaggtgaccacccctgcgcagatggtc
gcgctgggcgaggacgggctgaaggcgcacatcaagacgatcggcctgttcaacgccaag
gcgaagaacgtcatcgccctgtcggagaagctcatcgccgagcacggcggcgaagtgccg
cggaatcgcgacgcgctgaccgcgctgcccggcgtgggccgcaagaccgccaacgtggtg
ctcaactgcgcctggggcgaggaaacctttgcggtcgacacccatgtgttcagggtgggc
aaccgcactggcctggcgcggggcaagacccctgaggcggtcgaggcgcagctcgacaag
aaggtccccgcgccgttccgccaaggcgcgcaccactggctgatcctgcacggccgctac
acctgcaaggcgcgcaccccggaatgctggcgctgcgtggtggcggacttgtgcgcgttc
aggccgaagacggcggcggtcgaaaagaagtag
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