Novosphingobium sp. Gsoil 351: GKE62_16425
Help
Entry
GKE62_16425 CDS
T06443
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
nog
Novosphingobium sp. Gsoil 351
Pathway
nog01501
beta-Lactam resistance
nog01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
nog00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GKE62_16425
01503 Cationic antimicrobial peptide (CAMP) resistance
GKE62_16425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nog03036
]
GKE62_16425
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nog02000
]
GKE62_16425
01504 Antimicrobial resistance genes [BR:
nog01504
]
GKE62_16425
Chromosome and associated proteins [BR:
nog03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
GKE62_16425
Transporters [BR:
nog02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
GKE62_16425
Antimicrobial resistance genes [BR:
nog01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
GKE62_16425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
RND-MFP_C
HH_MFP_RND
Beta-barrel_RND_2
BSH_CusB
YknX_C
HH_AAEA_pHBA
HH_YBHG
Motif
Other DBs
NCBI-ProteinID:
QGN55903
LinkDB
All DBs
Position
complement(3409338..3410543)
Genome browser
AA seq
401 aa
AA seq
DB search
MLALTSSLPRHGRPSPKRVLTLIFPLAVLAACSAPAQDGKRGDKGPLQVGYRVVQPAAVP
LETELAGRVAASRSAEVRPQVTGVIQRRLFAEGSYVRQGQPLFQIDPSLYRAATAQAEAN
LASAQASASAAQTKAARYAPLASEQAVSQQEYTDVAASARVGRAVVAQNRAALNTARINL
RFTTVPAPISGRIGRSAFTEGALVTSAQSDPLATIAVLDPVYVDIQESAADLVALRRRMG
GNGAAPMTAEVRLLLDDGSEYGFAGKLRFSEITVDPATGSVTLRAEFPNPQGLLLPGMFV
RAKFAQTVLSDAYLVPQTALSRDPSGNARVYVLGAGNRAMQRAVTATRTVGANWVVTAGL
KPGERVLTQGLGKVKQGQPVKPVPESAPQTPGRRPAKQTKN
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgctggctctcacgtcctccctaccccgccacggacggccttcgcccaagcgggtcttg
acgttgatcttccccctcgcggtgctcgccgcgtgcagcgcccccgcgcaggatgggaaa
cgtggcgacaaaggcccgctgcaggtgggctatcgcgtggtccagcccgccgcggtgccg
ctcgagaccgagctggccggacgggtcgccgcctcgcgcagcgccgaggtgcggccgcag
gtgaccggggtgatccagcggcgattgttcgcggagggctcctacgtccgccagggccag
ccgctgttccagatcgatccgagtctctaccgcgccgcgaccgcgcaggccgaggccaac
cttgccagtgcccaggccagcgcgagcgcggcgcagaccaaggccgcgcgctacgctcca
ctagcgtccgagcaagccgtctcgcagcaggaatacaccgatgtcgcagcctcggcgcgc
gtcggccgcgcggtggtcgcgcagaaccgggcggcgctcaacaccgcgcgaatcaacttg
cgcttcaccaccgtccccgcgccgatttcgggccggatcgggcgctcggcgttcaccgag
ggcgcgctggtgacgtcggcgcaaagcgatcctctggccacgatcgcggtgctcgatccg
gtctatgtcgacatccaggaaagcgctgccgatctcgtcgcgctgcgtcgccggatgggc
ggcaacggcgccgcgccgatgactgccgaggtccgcttgctgctcgacgacggcagcgag
tacggatttgcgggcaagctgcgcttttccgagatcacggtcgatcccgcgaccggatcg
gtcaccttgcgcgccgagttccccaacccgcagggcttgctgctgccgggtatgttcgtg
cgcgcgaagttcgcccagacggtgctgagcgacgcctaccttgtcccgcagaccgcgctc
agccgcgatccgtcggggaacgcgcgggtctatgtgctaggcgcgggcaacagggcgatg
cagcgcgcggtcaccgcgacgcggaccgtcggcgcgaactgggtggtcaccgcggggctc
aagccgggcgagcgggtgctgacccaggggctgggcaaggtcaagcagggccagccggtc
aagccggtgcccgaaagcgcgccgcagaccccgggcagacgcccggccaagcagaccaag
aactga
DBGET
integrated database retrieval system
