Nordella sp. HKS 07: G5V57_32215
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Entry
G5V57_32215 CDS
T06462
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
noh
Nordella sp. HKS 07
Pathway
noh00300
Lysine biosynthesis
noh00550
Peptidoglycan biosynthesis
noh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
noh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
G5V57_32215
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
G5V57_32215
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
noh01011
]
G5V57_32215
Enzymes [BR:
noh01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
G5V57_32215
Peptidoglycan biosynthesis and degradation proteins [BR:
noh01011
]
Precursor biosynthesis
Amino acid ligase
G5V57_32215
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
LpxD
Motif
Other DBs
NCBI-ProteinID:
QIG51960
LinkDB
All DBs
Position
complement(6795865..6797331)
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AA seq
488 aa
AA seq
DB search
MSVPLSRLLADDAALPQGAKDAAISGLTADSRQVKPGFLFAALPGTKVDGAQFIPQAVAA
GAAAVVVGQTVTAPAANSILIKSANPHQLFARIASRFAGSQPDIVVAVTGTNGKTSVAAF
VRQIWQSMGFRAASIGTVGIVGPAGEEYLAHTTPDPVKLHHTLAGLAQDHVTHLAMEASS
HGLAQFRLDGVRLAAGGFTNLTRDHLDYHATYEEYFAAKMRLFSELLPEGAPAVVNADVE
IAQDVLGRAKAHGLTVFTVGEKGHDLKLVSCMLDGFGQRLVLATASGQHEVYLPLVGDFQ
VSNALVAAGLVIATGGEEALVLHALESLKGAKGRLDLVAHSAKGAPIFVDYAHTPDALEK
AILALRPYVKRRLAVVFGAGGDRDKGKRPQMGAIAAKFADIAYVTDDNPRSEDPAIIRAA
VMAACPGGIEIGDRALALRTAIEALEEGDILLVAGKGHELGQTISGKVLPFSDHDAVKAA
VGGQDYHG
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgcctctctcgcgcctcctcgccgacgatgccgcgctgccgcagggcgccaag
gacgcggcgatctccggtctcaccgccgacagccggcaggtgaagccgggcttcctcttc
gccgccttgccaggcacgaaggtcgacggcgcccagttcattccgcaggccgtcgcggcc
ggcgcggcagcggtggtcgttggccagacggtcacggcgccggcggcgaattcgatcctg
atcaagtcagccaacccacatcagctcttcgcgcgtatcgcgtcgcgcttcgccggcagc
cagcccgatatcgtcgtcgccgtcactggcaccaatggcaagacctcggtcgcggccttc
gtgcgacagatctggcagtcgatgggatttcgcgccgcgagcatcggcacagtcggcatc
gtcggaccggcgggcgaggaatatctcgcccatacgacgcccgatccggtcaagctgcat
cacacgctggcgggtctcgcccaggatcacgtcacccatctcgccatggaagcgtcgagc
cacgggcttgcgcagttccggctcgacggagtccggctggcggccggcggcttcaccaat
ctgactcgcgaccatctcgattatcacgcgacctacgaagaatatttcgccgcaaaaatg
cgactgttctcggagttgctgcctgagggcgcgcccgcggtggtcaacgccgatgtggag
atcgcccaggatgtgctggggcgcgccaaggcgcacggcctcaccgtcttcacagttggc
gagaaggggcatgatctcaagctggtctcctgcatgctcgacggcttcggccagcgcctg
gtactggcgacggcgagcgggcagcacgaagtctacctgccgctggtcggcgatttccag
gtgtccaacgcgctcgtcgccgccggcctcgtcatcgccacggggggcgaggaggccctc
gtcctgcatgccctcgaatcgctcaagggcgccaagggccggctcgatctggtggcgcat
tccgccaagggcgccccgatcttcgtcgactatgcccatacgcccgatgcgctggagaag
gcgatactggcgctgcggccctatgttaagcgcaggctcgccgtcgtattcggcgccggc
ggcgaccgggacaagggcaaacgcccgcaaatgggcgccatcgcggcgaagttcgccgac
attgcctatgtgaccgacgataatccgcgctcggaggatccggccatcatccgcgcggcg
gtgatggcggcttgcccgggcgggatagaaatcggcgaccgggcgcttgccctcaggacg
gcgatcgaagcgctggaagagggggacatccttctcgtcgccggcaaggggcatgaactc
ggccagacgatcagcggcaaagtgctgcctttcagcgaccatgatgcggtgaaggcggcg
gtaggcgggcaggattaccatggctga
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