Nocardioides jishulii: FCL41_04625
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Entry
FCL41_04625 CDS
T06163
Symbol
rlmC
Name
(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
noi
Nocardioides jishulii
Brite
KEGG Orthology (KO) [BR:
noi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
noi03009
]
FCL41_04625 (rlmC)
Enzymes [BR:
noi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
FCL41_04625 (rlmC)
Ribosome biogenesis [BR:
noi03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FCL41_04625 (rlmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
MTS
Methyltransf_25
Methyltransf_31
Methyltransf_11
Methyltransf_12
Methyltransf_15
Methyltransf_32
TRM5-TYW2_MTfase
Methyltransf_4
Motif
Other DBs
NCBI-ProteinID:
QCX29100
LinkDB
All DBs
Position
complement(967641..968777)
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AA seq
378 aa
AA seq
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MECAHFATGRCRSCSLLPVPRVDQVADKSAHVRTLLDPLGSPEWLEPFTGPEAGFRNKAK
MVAGGTVESPTLGILTPGGAGVDLRDCPLYTPRMHAALGVLAHFVTLARLVPYDLATRRG
ELKHVLVTEAPSGALMVRFVLRSTEPVLRIRKHLTTLLSQLREAGSPVEVVSVNLQPEHK
AVLEGPDEVVLHGETLTMQVNEVGLHLRPQSFFQTNTAVAAGLYRAARAWVGELAGDAES
VWDLYCGVGGFALHLATPGRRITGVEVSAEAVVSARTTATELGLDSLDFVTADATTWALA
QDEAPDLVVVNPPRRGIGDDLAGWLERSETPYVLYSSCNAQSLTRDLAAMGSLRPVRAQL
LDMFPQTGHYEVLVLLAR
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atcgagtgcgcccacttcgcgaccgggcggtgccgctcctgcagcctgctccccgtgccg
cgcgtcgaccaggtcgccgacaagagcgcccacgtgcgtaccctgctcgacccgctcggg
agcccggagtggctggagcccttcaccggccccgaggcaggtttccgcaacaaggcgaag
atggtcgccggcgggaccgtggagtcacccactctcggcatcctgacgcctggcggcgcc
ggggtcgacctgcgcgactgcccgctctacacgcctcgcatgcacgccgcgctcggcgtc
ctcgcccacttcgtgacgctcgcgcgcctcgtgccgtacgacctcgcgacgcgccgcggc
gagctcaagcacgtgctggtcaccgaggcgccctcgggcgcgctgatggtgcgcttcgtg
ctgcgctcgaccgagccggtgctgcggatccgcaagcacctgaccacgctcctgtcgcag
ctgcgcgaggccggcagccccgtcgaggtggtctcggtcaacctgcagcctgagcacaag
gccgtcctcgaggggcccgacgaggtcgtgctccacggcgagacgctgacgatgcaggtc
aacgaggtgggcctgcacctgcgcccgcagagcttcttccagaccaacaccgcggtggcc
gccgggctctaccgcgccgcccgcgcctgggtcggcgagctcgccggcgacgccgagagc
gtgtgggacctctactgcggggtcggcggcttcgcgctgcacctggcgacgccgggccga
cggatcaccggcgtggaggtgagcgccgaggccgtcgtgagcgcccgcaccaccgccacc
gagctcgggctggacagcctggacttcgtcacggccgacgcgaccacatgggccctggcc
caggacgaggcgcccgacctggtcgtggtcaacccaccgcggcgcggcatcggcgacgac
ctcgcgggatggctggagcgctcggagacgccgtacgtcctctactcgagctgcaacgca
cagagcctgactcgcgacctggccgcgatgggatcgttgcgccccgtacgcgcccagctg
ctcgacatgtttccgcagaccggtcactacgaggtgctggtgctcctcgcgcggtga
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