Noviherbaspirillum sp. UKPF54: FAY22_11720
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Entry
FAY22_11720 CDS
T06116
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
nok
Noviherbaspirillum sp. UKPF54
Pathway
nok03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nok00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FAY22_11720 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nok03400
]
FAY22_11720 (nth)
Enzymes [BR:
nok01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
FAY22_11720 (nth)
DNA repair and recombination proteins [BR:
nok03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FAY22_11720 (nth)
Prokaryotic type
FAY22_11720 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_8
DUF4817
Motif
Other DBs
NCBI-ProteinID:
QDZ28558
UniProt:
A0A5B8N7R1
LinkDB
All DBs
Position
2538142..2538792
Genome browser
AA seq
216 aa
AA seq
DB search
MNAEKRLEIFRRFRDANPHPTTELEYTTPFELLIAVILSAQATDVSVNKATRKLYPVANT
PDAICELGVEGLTEYIRTIGLYRTKAKNVIETCRLLMERHGGEVPRTREALEALPGVGRK
TANVVLNTAFGEATIAVDTHIFRVSNRTGIAPGKNVDEVERKLLKAVPAEFRHDAHHWLI
LHGRYTCIARKPQCWNCIIADLCEYRDKTPLPEKDI
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccgaaaaacgcctggaaatcttccgccgcttccgcgatgccaatccgcacccg
accaccgaactcgaatacacgacgccgttcgagctgctgatcgcggtgatcctgtcggcg
caggccaccgacgtgtcggtcaacaaggccacgcgcaagctgtacccggtcgccaatacg
ccggatgcgatctgcgaactgggcgtcgaaggcctgaccgaatacatccgcaccatcggc
ctgtaccgcaccaaggccaagaacgtgatcgaaacctgccgcctgctgatggagcggcac
ggcggcgaggtgccgcgcacgcgcgaggcgctggaagcgctgccgggcgtggggcgcaag
accgccaacgtggtcctcaacaccgcgttcggcgaggcgaccatcgcggtcgacacgcat
atcttccgagtttccaaccgtaccggcatcgcgcccggcaagaatgtcgacgaagtcgag
cgcaagctgctcaaggcggtgcccgccgaattccggcacgacgcgcaccactggctgatc
ctgcacggacgctacacctgcattgcacgcaagccgcaatgctggaactgcatcattgcc
gacctgtgcgaatacagggacaagacgccgctgccggaaaaagatatttaa
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