Noviherbaspirillum sp. UKPF54: FAY22_13260
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Entry
FAY22_13260 CDS
T06116
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
nok
Noviherbaspirillum sp. UKPF54
Pathway
nok01501
beta-Lactam resistance
nok01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
nok00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FAY22_13260
01503 Cationic antimicrobial peptide (CAMP) resistance
FAY22_13260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nok03036
]
FAY22_13260
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nok02000
]
FAY22_13260
01504 Antimicrobial resistance genes [BR:
nok01504
]
FAY22_13260
Chromosome and associated proteins [BR:
nok03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
FAY22_13260
Transporters [BR:
nok02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
FAY22_13260
Antimicrobial resistance genes [BR:
nok01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
FAY22_13260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
CusB_dom_1
HlyD_3
Biotin_lipoyl_2
THOC7
Motif
Other DBs
NCBI-ProteinID:
QDZ28836
UniProt:
A0A5B8NAE0
LinkDB
All DBs
Position
2875499..2876701
Genome browser
AA seq
400 aa
AA seq
DB search
MSSIRPISRIAAATMMLASLAACGDKIPSAQAQGAGMPPPEVSVVTVQPERIVVANELPG
RVEATRIAQVRARVPGIVLKRVFEEGSEVKAGDVLYRIDPAPFQATYNSTQAALAKAQAN
LAQATLKIQRYKPLVETNAISKQEYDDAVTAEKQATADVAAARAAQETARLNLGYATVNA
PISGRIGRAQVTEGALVGQGEATPLATVQQLDPIYVTVSQSSAELLRLKQALANGQLKSV
GKDRATVRLVTDDGRVYPHPGKLLFSDVTVDETTGAVSLRAVFPNPDRFLLPGMYARARI
EQAVDEQALTVPQQAVTRSPDGSAVMVVGQDGKVVAQPVKTGGVQDNKWIITDGLKAGDR
VIVEGLQKAKPGSTVKPTPWKGPAAAGQAGSAPAPAPQKS
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaattcgtcctatttcccgtattgccgctgccacaatgatgctggcgtcgctg
gccgcgtgcggcgacaagatcccgagcgcgcaagcccagggcgccggcatgccgccgccg
gaagtatcggtggtgacggtgcagccggagcgcatcgtggtcgccaatgaattgccggga
cgggtcgaggcgacgcgcatcgcacaggtgcgcgcgcgcgtgcccggcatcgtgctcaag
cgcgtgttcgaggaaggcagcgaagtcaaggccggcgacgtgctgtaccggatcgatccg
gctccgtttcaggcgacgtacaacagtacgcaggcggccctggccaaggcgcaggcgaac
ctggcgcaggcaacgctgaaaatccagcgctacaagccgctggtcgaaaccaatgccatc
agcaagcaggagtacgacgacgccgtgacggcggaaaagcaggcgaccgccgacgtcgcc
gccgcccgggcggcgcaggaaacagcccgcctcaacctcggctatgcgaccgtcaacgcg
ccgatttccggacgcatcggccgcgcccaggtgacggaaggcgcgctcgtcggccagggc
gaagcgaccccgctggcaaccgtccagcagctcgacccgatctacgtgacggtctcgcag
tccagcgccgaactgctgcgcctgaagcaggcgctggccaacggccagctgaaaagcgtc
ggcaaggaccgcgcgacggtcaggctggtcaccgacgacggccgcgtctatccgcacccc
ggcaagctgctgttttccgacgtgacggtggatgaaacgaccggcgcggtatcgctgcgc
gcggtcttccccaaccccgaccgcttcctgctgcccgggatgtacgctcgcgcacgcatc
gagcaggcggtcgacgaacaggcgctgaccgtgccgcagcaggcggtcacgcgttcgcca
gacggttcggcggtgatggtggtcggccaggatggcaaggtcgtcgcgcaacccgtcaag
accggcggtgtgcaagacaataaatggatcatcaccgacggcctgaaggctggcgaccgc
gtgatcgtggaaggcctgcagaaagccaagccgggctcgaccgtcaagccgacgccgtgg
aaagggccggccgcggccggccaggccgggagcgcgcccgccccggcaccgcagaaatcc
tga
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