Noviherbaspirillum sp. UKPF54: FAY22_15515
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Entry
FAY22_15515 CDS
T06116
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
nok
Noviherbaspirillum sp. UKPF54
Pathway
nok00270
Cysteine and methionine metabolism
nok00450
Selenocompound metabolism
nok00670
One carbon pool by folate
nok01100
Metabolic pathways
nok01110
Biosynthesis of secondary metabolites
nok01230
Biosynthesis of amino acids
nok04980
Cobalamin transport and metabolism
nok04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
nok00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
FAY22_15515 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
FAY22_15515 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
FAY22_15515 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
FAY22_15515 (metH)
04980 Cobalamin transport and metabolism
FAY22_15515 (metH)
Enzymes [BR:
nok01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
FAY22_15515 (metH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
TadB_TadC_N
DUF5817_CT
Motif
Other DBs
NCBI-ProteinID:
QDZ29247
UniProt:
A0A5B8NAB6
LinkDB
All DBs
Position
complement(3358955..3362710)
Genome browser
AA seq
1251 aa
AA seq
DB search
MKRDAISSTEALLRDLLAQRILVLDGAMGTMIQQYKLTEEDYRGARFADFAVPGKELFVK
GNNELLTLTQPQIISEIHEKYLAAGADLIETNTFGATSVAQDDYHMAHLVYEMNVQAAKL
ARAACDKYSTPDKPRFVAGALGPTPKTASISPDVNDPAARNVTFDQLVAAYLEQTRALVE
GGADVLLVETIFDTLNCKAALFAIDTFFEEAGKRLPIMISGTVTDASGRILSGQTVPAFW
HSVRHAKPLTIGLNCALGAALMRPYAEELSKIADTFVCVYPNAGLPNPMSDTGFDETPDV
TSSLMKDFAESGFVNIAGGCCGTTPEHIKAIADVVSKIAPRKVPEVAPAMKLSGLEPFVV
DESSLFVNVGERTNVTGSKAFARMILNEQYDEALSVARQQVENGAQIIDINMDEAMLDSV
AAMTRFLNLIASEPDIARVPIMIDSSKWSVIEAGLKCVQGKAVVNSISMKEGEEEFLRQA
KLCRRYGAAVIVMAFDETGQADTFERKTEICARAYRLLTEKVGFPPEDIIFDPNIFAIAT
GIEEHNNYAVDFINATRWIRDNLPHAKISGGVSNVSFSFRGNDPAREAIHTVFLYHAIKA
GLTMGIVNAGMVGVYDDLAPELRERVEDVVLNRRPDATERMIEFAATLKAGGKKEEQNLE
WRGEPVEKRLAHALVHGITQWIVEDTEEMRVKVLESGGRPINVIEGPLMDGMNIVGDLFG
QGKMFLPQVVKSARVMKQAVAHLIPFIEEEKRQEEARTGIVAKPKGKIVIATVKGDVHDI
GKNIVSVVLQCNNFEVVNMGVMVPCSDILAKAKAENADIVGLSGLITPSLEEMAHVAKEM
QRDPHFRMLKIPLLIGGATTSRAHTAVKIAPNYEGPVVYVPDASRSVSVAQSLLTQEQRD
QYIEEIKSDYERIREQHANKKTTPLISLAEARLNKAKLAFTGDAAPVKPKFIGRRVFKNV
DLATLANYIDWGPFFQTWDLAGPFPAILKDEVVGEQASKVYEEGQAMLKKVIEGRWLTAN
GVIALLPANTVNDDDIEIYTDDTRTQVAFTYYGARQQTVKPVIDGVQRPNQCLSDFIAPK
SSGIADYIGLFAVTAGLGIEKHEKRFLDAYDDYSSIMLKSLADRLAEAFAEHLHERVRRE
LWGYAPDEALDSAALIGEAYRGIRPAPGYPACPEHTVKADMFKLLQCDDIGMHVTESFAM
FPGASVSGFYFAHPASKYFVVGKIGEDQVADMAARRGVPKEDVERWLAPNL
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcgacgccatttcctctaccgaagcgctcttgcgcgacttgctggcccaacgc
atcctggttctcgatggtgcgatgggaaccatgatccagcaatacaagctgacggaagag
gattaccgcggagcgcgtttcgcggactttgccgtgccgggcaaggagttgttcgtcaag
ggcaataacgaattgctgacgctgacgcagccccagatcatcagcgaaatccatgaaaag
tatctcgccgccggcgccgacctgatcgagacgaatacctttggcgcgaccagcgtggcg
caggacgattaccacatggcgcacctggtgtatgaaatgaacgtgcaggccgcgaaactg
gcgcgcgccgcctgcgacaagtattcgacgccggacaaaccgcgtttcgtcgcgggcgcc
ctggggccgacgccgaagacggcatcgatttcgccggatgtaaatgacccggccgcgcgc
aacgtcactttcgaccagctcgtggccgcctacctggaacagacgcgggcactggtcgaa
ggcggcgccgacgtgctgctggtcgagacgattttcgacacgctcaactgcaaggcggcg
ctgttcgcaatcgatacgttcttcgaagaggctggcaagcgcctgcccatcatgatttcc
ggcaccgtcacagacgcttccggccgcatcctgtccggccagaccgtgccggccttctgg
cattcggtgcgccatgccaagccgctgacgatcggcctgaactgcgctctgggcgctgcg
ctgatgcggccctacgcggaagagctgtcgaagatcgccgacaccttcgtctgcgtctat
ccgaacgccggcctgcccaacccgatgtccgacaccggctttgacgagacgcccgatgtc
acgtcctccctgatgaaggatttcgccgagagcggcttcgtgaacatcgccggcggttgc
tgcggcaccacgccggagcacatcaaggcgattgccgatgtcgtcagcaagattgcaccg
cgcaaggtgcccgaagtggcgccggcgatgaagctgtcggggctggagccgttcgtcgtc
gacgagagttcgctgttcgtgaacgtcggcgaacgcaccaacgtgaccggctcgaaggcg
ttcgcgcgcatgattctcaacgagcaatacgacgaggcgctgtcggtggcgcgccagcag
gtcgagaacggcgcgcagatcatcgacatcaacatggacgaggcgatgctcgattcggtc
gccgcgatgacgcgctttctcaatctcatcgcctccgaaccggatatcgcgcgcgtgccg
atcatgatcgactcgtcgaaatggtcggtgatcgaagccggcctgaagtgcgtgcagggc
aaggcggtggtcaactcgatctcgatgaaggaaggcgaggaggagttcctgcgccaggcc
aagctgtgccgccgttacggcgccgccgtgatcgtgatggccttcgatgaaaccggccag
gccgacactttcgagcgcaagaccgagatctgcgcgcgcgcctacaggctgctgaccgag
aaggtgggcttcccgccggaagacatcatcttcgatccgaacattttcgccatcgcgacc
ggcatcgaggagcacaacaactacgcggtcgatttcatcaacgccacgcgctggatccgc
gacaacctgccgcacgcgaagatcagcggcggcgtgtcgaacgtcagtttttctttccgc
ggcaacgacccggcgcgcgaggctatccataccgtgttcctgtaccacgcgatcaaggcc
gggctgaccatgggtatcgtcaacgccggcatggtcggcgtgtatgacgacctggctccc
gagttgcgcgagcgggtggaagacgtggtattgaaccgccgtccggacgcgaccgagcgc
atgatcgaattcgccgcgaccttgaaggccggcggcaagaaggaagaacagaacctcgaa
tggcgcggcgagccggtggaaaagcggctcgcgcatgcgttggtgcatggcatcacgcaa
tggatcgtcgaagataccgaggaaatgcgcgtcaaggtcctggaatcgggcgggcgcccg
atcaacgtgatcgagggcccgctgatggatggcatgaacatcgtcggcgacctgttcggg
caagggaagatgttcctgccgcaggtggtcaagtcggcgcgcgtgatgaagcaggctgtg
gcgcacctgatcccgttcatcgaggaagaaaagcgccaggaagaggccaggaccggcatc
gtcgccaagccgaagggcaagatcgtgatcgccactgtcaagggcgatgtgcacgacatc
ggcaagaacatcgtgtcggtggtcctgcaatgcaataacttcgaagtggtgaacatgggc
gtgatggtgccgtgttccgacatcctggccaaggcgaaggcggagaacgccgacatcgtc
ggcctgtccggcctgatcaccccgtcgctggaggaaatggcgcacgtggccaaggaaatg
cagcgcgacccgcacttccgcatgctcaagattccgctgctgatcggcggcgccaccacc
agccgcgcccataccgcagtcaagatcgcgccgaactacgaaggtccggtggtgtacgtg
ccggacgcatcgcgctcggtgtcggtggcgcagtcgctcttgacgcaggagcagcgcgac
cagtacatcgaagagatcaagagcgattacgaacgtatccgcgagcagcacgcgaacaag
aaaacgacgccgctgatttcgctggccgaagcgcgcctcaacaaggccaagctggctttc
accggagacgccgcgccggtgaagccgaagttcatcggccgccgcgtgttcaagaacgtc
gatctggccaccctcgccaattacatcgactggggcccgttcttccagacctgggacctg
gccggtccattcccagcgatcctgaaggacgaggtggtcggcgagcaggccagcaaggtg
tacgaggaagggcaggcgatgctcaagaaggtgatcgaaggccgctggctgaccgccaac
ggcgtcatcgcgctgcttccggccaataccgtcaacgacgacgatatcgagatctatacc
gacgacacgcgcacgcaggtagcattcacctactacggcgcgcgtcagcagacggtcaag
ccggtgatcgacggcgtgcagcggcccaatcagtgcctgtccgatttcattgcgccgaaa
tcatcgggcatcgccgactacatcggcctgttcgcggtcaccgctggcttgggcatcgag
aaacatgagaagcgcttcctggatgcctacgacgactacagcagcatcatgctgaagtcg
ctcgccgaccgcctggccgaggcgtttgccgagcatctgcacgagcgcgtgcgcagggaa
ttgtggggctatgctccggatgaagcgctcgacagcgcggccctgatcggggaggcgtat
cgcggcatccgcccggcgccgggctatccggcctgcccggagcatacggtcaaggccgac
atgttcaagctgctgcaatgcgacgacattggcatgcatgtgacggaatcgttcgcgatg
ttccccggcgcgtcggtgtccggcttctacttcgcgcatccggcgtcgaagtatttcgtg
gtcggcaagatcggcgaggaccaggtggcggacatggcggcgcggcgcggcgtgccgaag
gaagatgtggagcgctggctggcgccgaacctgtaa
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