Novosphingobium sp. EMRT-2: FA702_04260
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Entry
FA702_04260 CDS
T06038
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
nor
Novosphingobium sp. EMRT-2
Pathway
nor01501
beta-Lactam resistance
nor01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
nor00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FA702_04260
01503 Cationic antimicrobial peptide (CAMP) resistance
FA702_04260
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nor02000
]
FA702_04260
01504 Antimicrobial resistance genes [BR:
nor01504
]
FA702_04260
Transporters [BR:
nor02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
FA702_04260
Antimicrobial resistance genes [BR:
nor01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
FA702_04260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
Motif
Other DBs
NCBI-ProteinID:
QCI92850
LinkDB
All DBs
Position
complement(861095..864289)
Genome browser
AA seq
1064 aa
AA seq
DB search
MFNIVKIALHRPLTFIVMAILIAIGGVLAALRTPVDIFPDIRIPVIAVAWQYSGLPPDDM
AARIITPYERTLTTTVNDIEHIESQSFQGIGIVKIYFQPGADIRTATAQVTSISQSVLKQ
MPPGITPPLILNYNASTVPIIQLAMSGKGLSEQQLFDLGQNQIRPQLVTVPGLAMPYPSG
GKQRQIQIDLNPLALQSKGLSAQDVGNAIAAQNQINPAGFVKIGPTQYSVRLNNAPDSVA
ALNDLPVKVVNGATITMRDVAFVRDGSAPQQNVVHVDGRRSVLLTVLKNGATSTLAIIDG
VKTTLPKIAAGLPDALRIVPVGDQSLFVKAAVSGVIREGAIAAALTSLMILLFLGSWRST
VIIALSIPLAILAAVAALAAFGQTMNVMTLGGLALAVGILVDDATVTIENINWHLEQGKG
VMEAILDGAAQIVTPAFVSLLCICIVFVPMFFLPGVAGFLFVPMALSVVFAMIASFILSR
TLVPTMAMYLLKPHQPEGENHHLAGAPRSRNPLVRFQRGFERRFEKIRDSYIGLLNRALE
VRRPFIIGFLAVVVMSFGLLPFLGSNFFPSVDSGQIAMHVRVPVGARIEDTAARFDRIGT
AIRQIIPAEQLGSLTDNIGLPVSSINTVYNNSGTIGPQDGDILIALKEGHEPTDRVVSRL
RSELARRFPGTTFSFLPADITSQILNFGAPAPIDVQITGRDVQASRAYAQKLLARMKLIP
GLADARIQQPANAPQLNVDVSRARIGQYGLTERDVTNSLAASLAGTSQTAPVFFVNPENG
VQYPVVAQAPEYLLDSVSALSNVPVSGAAGSAIQPLGGLAGVSRGTTVPVISHYNIQPTL
DIYGTTEGRDLGAVSGDIQAAIKALEKEQPKGVNVTIRGQFATMNTAFSGLGFGLIGAVV
LIYLLIVVNFQSWIDPFVIITALPAALAGIVWMLFGTGTTLSVPALTGAIMCMGVATANS
ILVVSFAREKLAEFGDARRAALKAGLVRFRPVLMTALAMIIGMAPMALGLGEGGEQNAPL
GRAVIGGLVCATIATLFFVPVVFSFAHRKRKVEATSPELQPSHA
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgttcaatatcgtcaagatcgcgttgcaccgtcccctgaccttcatcgttatggcgatc
ctcatcgccatcggcggtgtgctggcggcgctgcgcactccggtcgatatttttccggac
atccgcatcccggtcatcgccgtggcgtggcaatattcgggcctgccacccgacgatatg
gcggcgcgcatcatcacgccttacgaacgcacgctgacaaccaccgtcaacgatatcgag
cacatcgaaagccagtccttccagggcattggcatcgtgaagatctatttccagccgggg
gcggacatccgcacggcgaccgcgcaggtcacttcgatctcgcaatcggtgctcaagcag
atgccgccggggatcaccccgccgctgatcctgaactacaacgcctccaccgtgccgatc
atccagcttgccatgtcgggcaagggcctgtcggaacagcagttattcgatctgggccag
aaccagatccgcccgcagctggtgaccgtgcccggccttgccatgccctatccttcgggc
ggcaagcagcggcagatccagatcgatctcaatccgctcgcgctccagtccaaggggctg
tccgcgcaggatgtgggcaacgcgatcgcggcgcagaaccagatcaacccggccggcttc
gtcaagatcgggccgacgcaatacagcgtgcgcctgaacaacgcgccggattccgtcgcg
gcgctgaacgacctgccggtcaaggtcgtcaacggggccacgatcaccatgcgcgacgtg
gccttcgtgcgcgacggcagcgcgccgcagcagaacgtggtgcatgtcgatgggcgccgg
tcggtgctgctcaccgtgctcaagaacggcgcaacctcgacgctggccatcatcgatggc
gtgaagaccaccttgcccaagattgccgccggtctgcccgatgccttgcgcatcgtgccg
gtgggcgaccaatcgctgttcgtgaaggcggcggtcagcggggtgattcgcgaaggcgcc
atcgcggcggcgctgacctcgctgatgatcctgctgttccttggctcgtggcgctccact
gtcatcatcgcgttgtcgatcccgctggccatccttgccgcggtcgcggcgctggcggca
tttggtcagacgatgaacgtgatgacgctgggcgggctggcgctcgcggtcggcatcctc
gtcgacgatgcgacggtgacgatcgagaacatcaactggcacctggaacagggcaagggc
gtgatggaggcgatcctcgacggcgccgcccagatcgtgacgccggcgttcgtttcgctg
ctgtgcatctgcatcgtgttcgtgccgatgttcttcctgccgggcgtggcgggcttcctg
ttcgtgcccatggccttgtcggtggtcttcgcgatgatcgcctcgttcatcctctcgcgc
acgctggtgccgacgatggccatgtacctgctgaagccgcatcagccggagggcgagaac
caccaccttgccggcgcgccgcgatcgcgcaatccgctggtccgcttccagcgcgggttc
gaacggcgcttcgagaaaatccgcgatagctatatcgggctgctgaatcgcgcgctggag
gtccgcaggcccttcatcatcggctttctcgcggtggtggtgatgtcgttcggcctgttg
ccgttcctgggcagcaatttcttccccagcgtcgattccggccagatcgcgatgcatgtc
cgcgtgccggtgggcgcgcggatcgaggatacggcggcgcgcttcgatcggatcggaacc
gcgatccgccagatcatcccggcggagcagctaggatcgctgacggacaacatcggcctg
ccggtcagctcgatcaacaccgtgtacaacaacagcggcacgatcggtccgcaggacggg
gacatcctgatcgcgctgaaggaagggcacgaaccgaccgaccgcgtggtgtcgcgtttg
cgctccgaactggcgcgccgctttccgggcacgacgttctcgttcctgccggccgacatc
accagccagatcctgaacttcggcgcgccggccccgatcgatgtgcagatcacgggcagg
gacgtgcaggcgtcgcgggcctatgcccagaagctgctggcgcggatgaagctgatcccc
ggcctggccgacgcgcgcatccagcaaccggccaatgcgccgcagctcaacgtggacgtc
agccgcgcccgtatcgggcaatatggcctgaccgagcgcgacgtgaccaacagccttgcc
gcttcgctggccggaacctcgcagaccgcaccggtgttcttcgtgaatcccgaaaacggc
gtgcaatatccggtcgtggcgcaggcgccggaatacctgctggattccgtcagcgcgctt
tcgaatgtgccggtctccggggcggccggcagcgcgatccagccactcgggggcctggcc
ggtgtttcgcgcgggactacggttcccgtcatctcgcactacaatattcagcccacgctc
gacatctacggcacgaccgaagggcgcgatctgggggcggtttcgggcgatatccaggcg
gcgatcaaggcgctggagaaggagcagcccaagggcgtgaacgtgacgatccgtggccag
ttcgccacgatgaacacggcgttctcgggccttggcttcggcctgatcggcgcggtggtg
ctgatctacctgctgatcgtcgtgaacttccagagctggatcgatcccttcgtcatcatc
accgcgctgccggcggcgctggccgggatcgtgtggatgctgtttggcaccggcaccacc
ttgtccgtgccggccctgaccggcgcgatcatgtgcatgggcgtcgccaccgccaactcg
atccttgtcgtgagcttcgcgcgggaaaagctggcggaattcggtgacgccaggcgggcc
gcgctgaaagccggtctcgtccgcttccgcccggtgctgatgacggcgctggccatgatc
atcggcatggcgccgatggcgctggggctgggcgagggcggcgaacagaacgccccgctc
ggccgcgccgtgatcggcggcctggtctgtgccaccatcgccacgctgttcttcgttccc
gttgttttcagcttcgcccaccgcaagcggaaggtcgaagccacgtccccggagctgcaa
cccagccatgcatga
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