Novosphingobium sp. EMRT-2: FA702_05035
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Entry
FA702_05035 CDS
T06038
Symbol
shc
Name
(GenBank) squalene--hopene cyclase
KO
K06045
squalene-hopene/tetraprenyl-beta-curcumene cyclase [EC:
5.4.99.17
4.2.1.129
]
Organism
nor
Novosphingobium sp. EMRT-2
Pathway
nor00909
Sesquiterpenoid and triterpenoid biosynthesis
nor01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
nor00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
FA702_05035 (shc)
Enzymes [BR:
nor01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.129 squalene---hopanol cyclase
FA702_05035 (shc)
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.17 squalene---hopene cyclase
FA702_05035 (shc)
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GFIT
Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
Prenyltrans
Motif
Other DBs
NCBI-ProteinID:
QCI95277
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Position
complement(1011840..1013759)
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AA seq
639 aa
AA seq
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MTDPLAAVDAAVDRAASALSRAQRADGHWVFELEADCTIPAEYVLLRHYLGEPVAEELEA
KIGRYLRRTQSAEHHGWGLFHKGAFDVSATVKAYYALKMIGDDPAAPHMVRAREAVHKAG
GAEAVNVFTRIQLALFDAGPWSAVPTMPPELILLPRWFPIHLSKMSYWARTVVVPLLVLC
AKKPVARNAKGIKVDELYTRRPIDRKTQAADPKWVWTKSFNALDKVLKVAEGHWPRTLHQ
RAIDTCAAWVTERLNGEDGLGAIYPAMANSVMMFDVLGYPEDHPARAIARQSVENLLVIH
EDEAYCQPCVSPVWDTALAAHAMLEAGGADNVARAEAALDWLKPRQVLDVEGDWAEERPG
VRPGGWAFQYNNAHYPDLDDTAVVVMAMDRAQVADRMPIDRGVEWTVGLQSRNGGWGAFD
ADNDYDYLNNLPFADHGALLDPPTADVSARCVSMLAQLGEGLDSPRMAAAIAYLRKEQEP
EGSWFGRWGVNYIYGTWSVLCALNAAGLPADDPAVARAVGWLKAIQNPDGGWGEDCDSYA
LDRKGHVPAPSTASQTAWALLGLMAAGEADSEAVERGVDWLVANQEADGLWGQEYYTGGG
FPRVFYLRYHGYPKYFPLWAVARYRNLKRSNTRQVAFGM
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatccgcttgctgccgttgacgcggcggtggaccgtgccgcctcggcactctcc
cgcgcgcagcgcgccgatggtcactgggtgttcgagctggaagccgattgcacgattccg
gccgaatacgtcctgctgcggcactatctgggcgagccggtcgcggaggagctggaagcg
aagatcggccgttacctgcggcgtacccagtccgccgagcatcacggctggggcttgttc
cacaagggcgcgttcgatgtcagcgccacggtgaaggcctattacgcgctcaagatgatc
ggcgacgatcccgctgcgccgcacatggtccgggcgcgcgaggctgtccacaaagccggc
ggggcggaggcggtcaacgtcttcacccgcatccagcttgccctgttcgatgccgggccg
tggtcggccgtacctaccatgccgcccgaactgatcctgctgccgcgctggttcccgatc
catctgtccaagatgtcgtactgggcgcgcacggtggtcgtgcccctgctggtgctctgc
gcgaaaaagccggtggcgcgcaacgccaagggcatcaaggtagacgaactctacacgcgc
cggccgatcgaccggaagacgcaggcggcggaccccaagtgggtgtggaccaagagcttc
aacgcgctcgacaaggtgttgaaggtggccgaggggcattggcccagaacgctgcaccag
cgcgcgatcgatacatgcgcagcgtgggtgaccgagcggctcaatggcgaggacgggctg
ggcgcgatctatcccgccatggccaacagcgtgatgatgttcgacgtgctgggctatccc
gaggatcacccggcgcgcgccatcgcccgccagtcggtcgagaacctgctcgtgatccac
gaggacgaagcctattgccagccgtgcgtttccccggtgtgggataccgcgctggccgcg
cacgcgatgctggaagcgggcggggcggacaacgtggcacgcgcggaagcggcgctcgac
tggctaaagccccggcaagtgctcgacgtggaaggcgactgggcggaggaacgccccggc
gtgcggcctggcgggtgggcgttccagtacaacaacgcgcactatcccgacctcgacgat
acggccgtggtggtgatggcgatggatcgcgcgcaggtggcggaccggatgccgatcgat
cgcggcgtggagtggactgtgggcctgcaatcgaggaacggcggctggggcgcgttcgac
gcggacaacgactacgattacctcaataacctgccgttcgcggaccatggcgccctgctc
gatccgcccacggccgacgtttcggcgcgctgcgtctcgatgctggcgcaactgggcgag
gggctggacagcccgcgcatggccgccgcgatcgcctatctgcgcaaggagcaggagccg
gagggcagctggttcggccgctggggcgtgaactatatctacggcacatggtcggtgctg
tgcgcgctcaacgcggcggggctgccggcggacgacccggcggtggcgcgggcggtcggc
tggctcaaggcgatccagaacccggacggcggctggggcgaggattgcgacagctacgcg
ctcgatcgcaagggccatgttcccgcgccgtccaccgcgtcgcagaccgcctgggcgctg
ctgggcctgatggccgcgggcgaagccgattccgaggccgtcgaacgcggcgtggactgg
ctggtcgcaaaccaggaggctgatggcctctggggccaggaatactacaccggcggcggt
ttcccgcgcgtgttctacctgcgctatcacggatacccgaagtatttcccgctctgggcc
gtggcgcgctatcgcaacctcaagcggtcgaacacgcggcaggtggcgttcggcatgtga
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