Novosphingobium sp. EMRT-2: FA702_09425
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Entry
FA702_09425 CDS
T06038
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
nor
Novosphingobium sp. EMRT-2
Pathway
nor03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FA702_09425 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nor03400
]
FA702_09425 (nth)
Enzymes [BR:
nor01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
FA702_09425 (nth)
DNA repair and recombination proteins [BR:
nor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FA702_09425 (nth)
Prokaryotic type
FA702_09425 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
RecR_HhH
HHH_8
Motif
Other DBs
NCBI-ProteinID:
QCI93761
UniProt:
A0A4D7DB14
LinkDB
All DBs
Position
complement(1903554..1904264)
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AA seq
236 aa
AA seq
DB search
MKKDAIFEFFRRLAEANPDPQTELEFGNTYQLLVAVVLSAQATDVGVNKATRALFRDVKT
PQAMIDLGEEGLKQHVKTIGLFNAKARNVIALSEILVRDYGGEVPADRDKLTELPGVGRK
TANVVMNCAFGAETFAVDTHIFRVGNRTGLAKGKTPLAVEKQLEKKVPQPFRVGAHHWLI
LHGRYICKARTPECWRCPVIDLCAYKEKTPAKGVKPDSAKKPAARKGTRASKERTA
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
ttgaagaaggacgcgatcttcgagttcttccggcggctggcggaggccaaccccgatccg
cagaccgaactggaattcggcaatacctatcagctgctggtggcggtggtgctctccgcg
caggcgacggacgtgggcgtcaacaaggccacgcgcgctctgttccgtgacgtgaagacg
ccgcaggcgatgatcgatctgggcgaagaagggctgaagcagcacgtcaagacgatcggc
ctgttcaacgccaaggccaggaacgtgatcgcgctgtccgaaatcctggtgcgcgattac
ggcggcgaggtgccggccgaccgcgacaagctgaccgaactgcccggcgtgggccgcaag
accgccaatgtcgtgatgaactgcgcgttcggcgcggaaacgttcgcggtggatacgcat
atcttccgcgtgggcaaccgcaccgggctggcgaagggcaagacgccgctggcggtggaa
aagcagctcgaaaagaaggtgccgcagccgttccgcgtgggcgcgcaccactggctgatc
ctgcacgggcgctatatctgcaaggcgcgcacgcccgaatgctggcgctgcccggtgatt
gacctttgcgcctacaaggagaaaactccggccaagggcgtgaagcccgactccgcgaag
aagcccgccgcacgcaagggaacgcgggcaagcaaggagcgcacggcatga
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