Nostoc sp. UHCC 0926: PQG02_24980
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Entry
PQG02_24980 CDS
T10708
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
nosq Nostoc sp. UHCC 0926
Pathway
nosq01501
beta-Lactam resistance
nosq01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
nosq00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PQG02_24980
01503 Cationic antimicrobial peptide (CAMP) resistance
PQG02_24980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nosq03036
]
PQG02_24980
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nosq02000
]
PQG02_24980
01504 Antimicrobial resistance genes [BR:
nosq01504
]
PQG02_24980
Chromosome and associated proteins [BR:
nosq03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
PQG02_24980
Transporters [BR:
nosq02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
PQG02_24980
Antimicrobial resistance genes [BR:
nosq01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PQG02_24980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
BSH_RND
BSH_CzcB
BSH_CusB
YknX_C
RND-MFP_C
HH_MFP_RND
Beta-barrel_RND
BSH_YhbJ
CzcB_C
Biotin_lipoyl
HH_YBHG
DUF7977
Motif
Other DBs
NCBI-ProteinID:
WDD31903
LinkDB
All DBs
Position
5357702..5359060
Genome browser
AA seq
452 aa
AA seq
DB search
MDSQPPASPDSQQQTTSKKRRGIGRIGWAVIGAVFFGSLLAIGILPRLSQRSELQAAVKE
ASTLTSVNIITPRRAAATTNLELPGSVVALNQTTIYARSTGYLRRWYADIGDRVQAGQLL
AEIDSPDIDQQVLQAKAEFVQAQANVLQSRASLAKGASDLKQAQANLLIARQSWLRWSVL
VKQGAVPQQDADTRYATYQANLANVEAAKNTINSDSANVKAAQANAYAIQANFQRNIVLQ
SYKKVTAPFAGVITARNVNTGVLISAGSGNSNTSSNTNTSNTNTSNTSLYTIAAYDKLNV
NVNVPQSLSPSLQTAQTAEITVKELPQRAFTGKVVRTSNAIDPNTRTLLTQLEVENYNAT
LRPGMYATVKFAINRTNSPFVVPDSALVVNAGGTQVATLTKDQTVHYQKVVVGRDYGTEV
EITSGLTGNESLIATPTVDETEGLRVQPAQTK
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggattctcagcctcctgcatctcctgattctcaacaacaaacgacttctaaaaaaagg
cgcggcatcggtcgaattggttgggctgtaattggtgctgttttttttggtagcctacta
gccataggtattctgcctcggttaagccaaaggtcagaattacaagcagcagtcaaggaa
gcaagcaccttaacctcagtcaacattatcactcctcgtcgcgctgctgctactactaat
ttggaactacctggcagtgttgtagcccttaaccaaacgaccatctacgctcgcagtact
gggtatttgcggcggtggtacgcagacattggcgatcgcgtgcaggctggtcaattatta
gcagagattgattcaccagacatagatcagcaagttttgcaagcaaaggcagagttcgtg
caagcacaagctaacgtccttcaaagtcgtgctagtttagctaaaggtgcttctgatttg
aagcaagcccaggctaatctattgatcgcacgtcagagttggctgcgctggagtgttctt
gtcaagcaaggtgcagtgcctcaacaagatgcagatacaagatatgccacatatcaggct
aatcttgccaacgttgaggcagcaaaaaatactatcaattctgactctgctaacgtcaaa
gcagcacaagctaacgcctacgccattcaagcaaacttccagcgtaatatcgtattgcag
tcttacaagaaagtcactgctcctttcgcaggggtgattaccgcacgtaatgtaaataca
ggtgttttaatttcagcaggtagtggcaacagcaatactagtagtaacaccaataccagc
aacaccaatactagcaataccagcctttatactattgctgcttatgacaagctaaatgtg
aatgtgaatgttccacagagtttatcaccgtcacttcagactgctcaaacagcagaaatt
acagtcaaagagttaccacaacgagcgtttacaggtaaagtagtgcgtactagcaacgct
atagatccaaatactcgcactttgctgacacaattagaagtggagaattacaacgcgacg
ttgcgacctgggatgtatgccactgtcaaatttgcgattaaccgcactaatagtcccttt
gttgtgccagatagtgccttagtcgttaacgccggaggtacgcaggtagcaactctaact
aaagatcaaacagtgcattatcaaaaagttgtcgttgggcgagattatggtactgaagta
gaaattacatcaggtctgacaggaaatgaatcgctgattgccactcctacggttgatgag
acagagggtttgcgcgtgcagccagcacaaacaaagtag
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