Nostoc sp. ATCC 53789: GJB62_20110
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Entry
GJB62_20110 CDS
T10687
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
nost Nostoc sp. ATCC 53789
Pathway
nost01501
beta-Lactam resistance
nost01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
nost00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GJB62_20110
01503 Cationic antimicrobial peptide (CAMP) resistance
GJB62_20110
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nost02000
]
GJB62_20110
01504 Antimicrobial resistance genes [BR:
nost01504
]
GJB62_20110
Transporters [BR:
nost02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
GJB62_20110
Antimicrobial resistance genes [BR:
nost01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
GJB62_20110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
TMEM220
Motif
Other DBs
NCBI-ProteinID:
QHG18057
LinkDB
All DBs
Position
complement(4891199..4894390)
Genome browser
AA seq
1063 aa
AA seq
DB search
MFVDFFIKRPIFASVCAIVILLIGLISIPTLPIARFPEISPTQITVTSNYSGASAEVVES
GVTNILERQINGVEGLRYLTSSSSNDGTSTITATFDSSRDKDIAAVDVQNRVSVAQPQLP
DSVQRTGVRVSKESSNILLAIGLFAENKEYDNIFLSNYADLYLADALKRVKGVSNAQIFG
ERRYAMRLWLDPSRLASRGLTTKDVANALSEQNLQVGAGRIGQEPAPEGQRYQLDVRAAS
RLAEPSEFEEIVLKTEEDGTLVKLKDVGKAELGAENYNTFLRFRGNDAVGLGIYQVPGSN
ALDVAKGVKDEMARLAPSFPPGMKYQVAFDTTSFVEESMSEVIKTLIEAVVLVVIVIFVF
LQDWRTTLIPALTIPLALIGTFAFVKIFNFSINSLTLFGLTLASGMVVDDAIVVVEQISR
FIQDKGVSPRRAASESMRELFGAVIATSLVLMAVFVPVAFFPGTTGALYRQFALTIAFSI
AISTFLALTLTPSLCGVLLRQEQQVPRWIGWFFDLINRFLEWVRSSYERSLTWMVRFKSI
VIGLFIVSLGMTAWLYTTVPTAFLPDEDEGYFITIIQGPQGVSLQYTSDVMAQVEKEILP
LPEVLGTFAVGGFGFSGSTANSGIIFTTLKPWDERSRPDQSVQAIIGKLQGKLLSIPEAR
VFPVNPPPIQGLGNFGGFVFQLQDRRGNSGLENLVQSMGKLLGQANQTPGLQAVFSTFAA
DTPQLLVEVDRNKAKSLQVSIDDVFSTLQTALGSQYVNDFNLQQRNYRVYIQADQQFRSN
PKDIGKLYVRSQKNQMVPLSNLVTVTQTVGAQTINHYNLFRSIEINGSAAPGSSSGDAIK
AMEKVAKEVLPAGYGYEWSGTALEEIDSGGLAPIIFGLGIIFVFLVLAAQYENYVDPFII
LLSVPLAIFGALIAQSMRGFANDVYCQIGLVMLIGLASKNAILIVEFANQLREQGLSITK
AVIEASQERLRPILMTAFSTLLGIFPLAVATGAGAGSRQSLGTAVFGGMLIATFLSLFVV
PILYIVIKTTTERFIKPNRHQELQTDAVSLDGKTPAYLTKGEN
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttgacttctttattaagcgaccaatctttgcatcggtatgtgcgatcgttatc
cttttaatcggattaatcagtattcccacactaccgatcgcaagattcccagaaattagt
cccacccaaatcactgtaacttccaactatagcggagctagtgcagaagtcgtagaaagc
ggagtgacaaatatcttagaaaggcaaatcaacggggttgagggactaagatatctcact
tccagcagcagtaatgatggtactagtactattactgccacctttgattcatcgcgtgat
aaagatattgcggctgtggatgtgcaaaatcgtgtttctgttgcccaaccacaattacca
gactctgtgcaacgcacaggagtgcgggtatcaaaagaatctagcaacattctcttagcg
attggtttattcgctgaaaataaagagtacgacaatatatttttaagcaactatgccgat
ctgtacttagcagatgccttaaaaagagtcaaaggcgtgagcaacgctcaaatttttggt
gaacgccgctatgcaatgcgtttgtggttagatccgagtcgccttgctagtcggggacta
acgaccaaggatgtagcgaatgctttatctgaacaaaacttgcaagttggcgcagggaga
attggacaagaaccggctcctgaagggcaaagatatcaacttgatgtgcgtgctgccagc
cgattagcagaaccatcagaatttgaagaaattgtcctcaaaactgaagaggatggcaca
ttagtcaagctcaaagatgtcggtaaagccgaactgggtgcagaaaattacaacacattt
ttgcggttccggggcaatgatgctgtaggtttagggatttatcaggttcctggcagtaat
gccttggatgtagcgaaaggagtcaaagatgaaatggcgcgattggctccgagttttcca
ccaggcatgaaatatcaggtagcttttgacacaacatcgtttgtagaagagtcgatgtca
gaagtcatcaagactctgattgaagcggtagtgctggttgtgattgtaatttttgtgttc
ttgcaggattggcgaaccactttaattccagcactgactattcctctagcactaattgga
acgtttgcctttgtcaaaatttttaacttttctatcaatagtttgactttatttggtctg
actttagcatcggggatggtggtagacgatgcgatcgttgtggtggagcaaattagccgt
tttattcaggataaaggcgtaagtcctcgtcgagccgcaagtgaatcaatgagggaactg
tttggcgcggttattgccacttcactagtattgatggcggtgtttgtgccagtggcgttt
tttccgggaactacaggcgcactttatcggcaatttgcgctgacgatcgccttttctatt
gcgatttcgacatttctagctttgactctaacaccttctttgtgtggggtgctgctacgt
caagaacaacaagtaccaaggtggattggctggttttttgacctgattaatcggttcctg
gaatgggtaaggtcaagttatgagcgatcgcttacctggatggtacgattcaaaagcatc
gtcattggactgtttatcgtttctttgggaatgactgcttggctgtacaccacagtaccg
acagcttttctacccgatgaagacgaaggctatttcatcaccatcatccaagggcctcaa
ggtgtttcgctgcaatataccagcgatgtcatggcacaagtagaaaaagaaattctgcca
cttccagaagtgctaggtactttcgccgtgggaggatttggttttagtggcagcaccgcc
aatagcggcattatatttaccactttaaaaccttgggatgagcgttcaagacccgatcaa
tcagtacaggcgattattggtaaattgcaagggaagttattgtcaatcccagaagccagg
gtttttcctgtgaacccgccaccaattcagggtttaggtaactttggcggctttgtcttt
caactgcaagaccgcagaggtaacagtggtttagaaaatctagtccagtcaatgggtaag
ttgctcggtcaagctaatcaaacaccaggattacaagctgtatttagcacctttgcagca
gatacaccacaattgcttgtagaagtagaccgcaataaagccaaatcattgcaagtttcc
atagatgatgttttcagtactttacaaactgctttgggatcgcaatatgtaaatgatttt
aatctccagcagcgtaattatcgggtgtatatccaggcagatcaacagtttcgttccaat
ccaaaagatattggcaaactatacgttcgttctcaaaagaatcaaatggttcctttgagt
aacttagttacagttactcagactgtgggagcgcaaacgataaatcactataatctgttc
cgctcgattgaaattaatggttccgccgctcctggctctagttcgggagacgcaattaaa
gcaatggaaaaagttgctaaagaagttttaccagccggctatggttatgaatggtcaggg
actgcattagaagaaatagattctggtggtttagcacccataatctttggattaggaata
atctttgtatttttggtactagccgctcaatacgaaaactacgttgacccctttatcatt
ctgttatcagttcctttagctatctttggagcgctgatagctcaatcaatgcggggtttt
gcaaatgatgtttactgtcaaattggtctagtaatgttgatcggtttagctagtaagaac
gcaattttgattgtggaatttgctaatcaattacgagagcaagggctttcgattactaaa
gcagtaattgaggcttcacaagagcggttacgcccaattttgatgactgctttttctaca
ttattaggtattttcccgttagctgttgccacaggtgccggtgcgggaagtcgtcaatct
ttgggaacagcagtttttggtgggatgttaattgcgactttcttgagtttgtttgtagta
ccgattttgtatatcgtgattaagacgacaacagagcgctttattaaaccaaatcggcat
caagaactgcaaacagatgcagtttcattggatggtaaaactcctgcatatttaacaaaa
ggtgagaattaa
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