Nostoc sp. UHCC 0702: JYQ62_08620
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Entry
JYQ62_08620 CDS
T10690
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
nosu Nostoc sp. UHCC 0702
Pathway
nosu01501
beta-Lactam resistance
nosu01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
nosu00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JYQ62_08620
01503 Cationic antimicrobial peptide (CAMP) resistance
JYQ62_08620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nosu03036
]
JYQ62_08620
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nosu02000
]
JYQ62_08620
01504 Antimicrobial resistance genes [BR:
nosu01504
]
JYQ62_08620
Chromosome and associated proteins [BR:
nosu03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
JYQ62_08620
Transporters [BR:
nosu02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
JYQ62_08620
Antimicrobial resistance genes [BR:
nosu01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JYQ62_08620
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSH_RND
YknX_C
BSH_CzcB
BSH_YknX
CzcB_C
BSH_CusB
Biotin_lipoyl
Beta-barrel_RND
Beta-barrel_RND_2
RND-MFP_C
HH_MFP_RND
HH_AprE
PBP1_TM
HrpB7
PCSK9_C1
Motif
Other DBs
NCBI-ProteinID:
QSJ18799
LinkDB
All DBs
Position
complement(1859281..1860600)
Genome browser
AA seq
439 aa
AA seq
DB search
MTSPEPQTDFGDQLPQTSYEPPRKQRRWLRLLLALILIVGGGTAVVWRLLTPANQQPAST
NAQPPGVRVKVAPVQIGTIDESTEYIASLESRRSVTLQPRIQGQVTQIFVRSGDTIATGA
AVIQVDPRQQQAAVSSIDAAAQASKAQLENARATLKSLEAERLSNLADLQLNQQDYNRYA
TLADQGAVARQTKDQYANRLATAKANLGVINSRISAQKASILQAEKDLQQAQANTEQQQV
QLQYYRISAPFDGTVGDIPVKIGDFVNTSTQLVTITQNRPLEVKISVPTDKGAELRKGMP
VELLNTQGQVIGTSRVFFIAPNASNDTQSILIKALFNNSKGELRADQLVRARVVWSERSG
VLIPATAVSRVAGETFVYVAETQTSPKGVSQLVARQKPVKLGNIRGNNYQVLEGLQPQEQ
IVISGLLNLRDGLPIVPES
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgacatcccctgagcctcaaaccgattttggagaccagcttccccagacctcctacgag
ccaccccgcaaacaacggcggtggcttcggttattgttagctttaatactaatcgtaggg
ggtggaacagctgtagtttggcgtttgctcactcctgcaaaccaacaacctgcatctact
aatgctcaacctccaggggtaagagtcaaagtagctccagtccaaatcggcacaattgac
gagagtacagaatatatcgccagtcttgagtctcggcgttccgtgacactccagccgaga
attcagggtcaagtcacgcaaatatttgtcaggtcgggagatacaatcgcaacgggagcg
gcagttatccaagtagaccccagacagcaacaagcagcagtcagtagtattgatgctgct
gcccaagcatctaaagcacaattggagaatgctcgcgctacactcaaatccctagaagcc
gaacgtttatccaaccttgctgatttgcaattgaatcagcaggactacaacaggtatgcg
accttggcagaccaaggagccgtggctcgacaaacaaaggatcagtatgccaataggctc
gccacagccaaagctaatctcggtgtcattaattccaggatttcagcccagaaagctagc
atattgcaggctgaaaaggacttgcagcaagctcaggcaaatactgaacaacaacaagtt
cagcttcagtactaccgcattagcgctccctttgatggcacagttggcgatatcccagtc
aaaataggtgattttgttaacacttccacacagctagtgacaattactcaaaaccgacct
ttagaagtcaaaatatctgtgccaacagacaaaggggctgaattacgtaagggaatgcct
gtagagttattgaatacacaaggtcaagtcataggtactagtcgcgtatttttcatagct
ccaaatgccagcaatgatacccagtcaatattgattaaagcactttttaataactcaaaa
ggtgagctacgggcagatcaattagtgcgagctagagtggtgtggagtgagcgttctgga
gtattaattccagctacagcagtgtctcgtgtagctggagaaacttttgtctacgtagcc
gaaacccaaacatctccaaaaggagtatcgcaactggtagctaggcaaaaaccagtgaaa
ttaggcaatattagaggtaataattaccaagttctcgaaggattacagccacaagagcaa
attgtcatctcaggactactgaatcttagagatggcctgccgatagttcctgaatcttag
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