Nostoc sp. UHCC 0702: JYQ62_16635
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Entry
JYQ62_16635 CDS
T10690
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
nosu Nostoc sp. UHCC 0702
Pathway
nosu01501
beta-Lactam resistance
nosu01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
nosu00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JYQ62_16635
01503 Cationic antimicrobial peptide (CAMP) resistance
JYQ62_16635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nosu03036
]
JYQ62_16635
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nosu02000
]
JYQ62_16635
01504 Antimicrobial resistance genes [BR:
nosu01504
]
JYQ62_16635
Chromosome and associated proteins [BR:
nosu03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
JYQ62_16635
Transporters [BR:
nosu02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
JYQ62_16635
Antimicrobial resistance genes [BR:
nosu01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JYQ62_16635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_YBHG
BSH_RND
YknX_C
BSH_CzcB
BSH_YknX
Biotin_lipoyl
HH_MFP_RND
CzcB_C
BSH_CusB
RND-MFP_C
Beta-barrel_RND_2
Beta-barrel_RND
HH_EMRA
Hyphal_reg_CWP
BSH_LcnD
DUF1090
DUF7283
Motif
Other DBs
NCBI-ProteinID:
QSJ20189
LinkDB
All DBs
Position
3749690..3751258
Genome browser
AA seq
522 aa
AA seq
DB search
MPDSQFPDSPISLETEQPAVTDSNEVEQQLPKPRKKRPWPLILGIILLLVGGGLGWRWWQ
NSLASNPPQGAGAAGKPMAIPVKLATVETGTIQEATELVGSLEAPRSVPLKPQVEGRITQ
IAFKEGDRIRQGQVVIRLQSDDAQAQLLQAKATLEQSQARLAELKAGTRIEEVAQARATL
AQAQARLSDAQAGAQPEEIAQAQAQINSAKSDLDLAQARARRYQQLRQQGAISQDTLEGY
LQEQRSADAALVVAQRRLEQLKKSRRSDIDELAAALEQQQQNLRQLENGSRPEEIAQARS
QVSQAAAQVQAAQVQLQYTNVLAPFTGIVGDIPVRVGEYVSKGDQLTTLTKNDSLELNLA
IPLTQAKQLRLGLPVQMLDAESKATATGKVSFISPDANTSSQSVLAKATFSNFGNQLLNR
QLVPSKLIWDERPGILIPVTAVSRLGGQTFVFVAEAPEKPQPGGPSLVAQQKLVKLGSIQ
GGNYQVLEGLKAGEKIVVSGILNLTNGVPIKPTSEGTGGAKP
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgcccgattctcaattccctgattccccaatctcccttgaaacagaacagcctgctgtt
actgattccaatgaagttgaacaacaactgcctaagccaagaaaaaagcgaccttggcct
ttaatattgggaattattttgttactggtaggtggtggtttgggttggcgctggtggcaa
aatagccttgccagtaatccaccccaaggcgctggtgcagctggtaaaccaatggcgatt
ccggtgaagctagccactgtggaaactggaactatacaagaagctaccgagttagttggc
tccttggaagctccccgctcagtaccactcaagccacaggttgaggggcgaattacccaa
attgcatttaaagaaggcgatcgcatccgacaagggcaagtcgtgattcgcctgcaaagt
gatgacgcccaagcccagctattacaagcaaaagccacactagaacaatcccaggcacgt
cttgccgaactcaaagcaggtacacgcattgaagaagttgcccaagccagagctacctta
gctcaagctcaagctcgcctatctgatgctcaagccggagcgcaaccagaagaaattgct
caagcccaagctcaaattaattcagccaaatctgatttggatctagcacaggcacgagct
aggcgatatcaacaattaagacaacaaggtgcaatttctcaagatactctagaaggatat
cttcaagaacagcgtagtgctgacgctgcactggttgtagctcaacggcgcttagaacaa
ctcaaaaaaagcagacgctctgatattgatgagctagccgccgcgctggaacaacagcaa
caaaacttaaggcaattagaaaacggttcgcgtccagaagaaattgctcaagctcgttct
caagtatctcaagcagctgcccaagtccaagctgcccaagtccaattgcaatacacaaac
gttctagctccttttactggcattgtcggtgatatcccagtgagggtaggagagtatgtc
agcaaaggagatcaactcaccacacttaccaaaaacgattctttggaactgaatctagcc
atcccactaacccaagctaaacagttgcgtttaggattacccgtgcaaatgttggatgct
gaaagcaaagcaacagctacgggtaaggtgagttttatctcaccagatgccaatacaagt
tcgcagtcagttttagctaaagccacctttagcaattttggaaaccaactgctcaatcgt
cagttagtaccaagcaaattgatttgggacgaacgtccaggaattttaattccagtgaca
gcagtatctcgtttaggtgggcagacttttgtctttgttgctgaagctccagaaaaacct
caacctggagggccatctttagtagctcaacaaaaactcgtgaaattgggaagcatccag
ggaggtaattatcaagttctcgaaggactcaaggctggtgagaagatcgttgtttccggc
attctcaacctcaccaatggtgtccctatcaaacctacatctgaaggaacgggtggtgca
aagccatga
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